|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044922 ID=TCONS_00044922|Name=TCONS_00044922|organism=Clytia hemisphaerica|type=transcript|length=569bp
GACAAGACAAAGGTTTGATTAAGGAATGCGCTTTCGTGAAGAAGTTCACG
TCGACATACCTCAGAATTTCCGTTTCCTCAAATGGTCGTGTGTACGGATG
TACTAGATGCTGTAAACGCTGGTTTGTTACCCTTGACAACAAAGAGTGTA
CACCAGGGGCGATTGATTATGCACATTTCCAGAGAGACGCGTCCAACAAT
GATATTGGAAATTTCCTTTTAAANCTGGTTTGTTACCCTTGACAACAAAG
AGTGTACACCAGGGGCGATTGATTATGCACATTTCCAGAGAGACGCGTCC
AACAATGATATTGGAAATTTCCTTTTAAAAGGTCAGTGTCGTATCCCGAA
AACCGGTTCAGTGAAAATTGGTTTCAATATCGGGAATTGCGATGGATACG
GTGATTCTGACGGTTTCACTGGCTATAAACAGCTTACTAGAATCACGATC
GAAGAAGTCGCACCACCTCAAGCATGAGGAATTTAAATATAGAACCATCG
TTGTAtgttttaatcaaaaatataacTTTGCATAATTCTTTacttatttt
tagaaattattGAGGTCCC Run BLAST on NCBI transcript from alignment at sc0006476:792..1697+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044922 ID=TCONS_00044922|Name=TCONS_00044922|organism=Clytia hemisphaerica|type=transcript|length=906bp|location=Sequence derived from alignment at sc0006476:792..1697+ (Clytia hemisphaerica)
GACAAGACAAAGGTTTGATTAAGGTAAAGCTTTATTAATCATTCAAAAGA
ACTCACGCACCAACGTCAAAAGATTACGAGAAAGAGAGTCAAAAAGTCTA
AagaaagtcttttgaaatacaATTTATGCACATTGGATGTCTGTAAAAAG
ATTTAGTCATCGATTTTTCAGCAGATGgtgtgaatttaaagaaaacaaag
tactatgatgaaatgaattgttaagataaaagataaaaaaaaatcaagtc
caACTGTTTTCTAAGCTGCTGGAATATAGTAACGGATTTGTGCTCCTGCT
ATATTACCTgcagttttgtagaggtctgccgTTCGCAAAAaaatatactt
ttctttttagGAATGCGCTTTCGTGAAGAAGTTCACGTCGACATACCTCA
GAATTTCCGTTTCCTCAAATGGTCGTGTGTACGGATGTACTAGATGCTGT
AAACGCTGGTTTGTTACCCTTGACAACAAAGAGTGTACACCAGGGGCGAT
TGATTATGCACATTTCCAGAGAGACGCGTCCAACAATGATATTGGAAATT
TCCTTTTAAANCTGGTTTGTTACCCTTGACAACAAAGAGTGTACACCAGG
GGCGATTGATTATGCACATTTCCAGAGAGACGCGTCCAACAATGATATTG
GAAATTTCCTTTTAAAAGGTCAGTGTCGTATCCCGAAAACCGGTTCAGTG
AAAATTGGTTTCAATATCGGGAATTGCGATGGATACGGTGATTCTGACGG
TTTCACTGGCTATAAACAGCTTACTAGAATCACGATCGAAGAAGTCGCAC
CACCTCAAGCATGAGGAATTTAAATATAGAACCATCGTTGTAtgttttaa
tcaaaaatataacTTTGCATAATTCTTTacttatttttagaaattattGA
GGTCCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044922-exon-sc0006476-1491911889:792..814 | TCONS_00044922-exon-sc0006476-1491911889:792..814 | Clytia hemisphaerica | exon |
| TCONS_00044922-exon-sc0006476-1510915933:792..814 | TCONS_00044922-exon-sc0006476-1510915933:792..814 | Clytia hemisphaerica | exon |
| TCONS_00044922-exon-sc0006476-1575043694:792..814 | TCONS_00044922-exon-sc0006476-1575043694:792..814 | Clytia hemisphaerica | exon |
| TCONS_00044922-exon-sc0006476-1491911889:1152..1697 | TCONS_00044922-exon-sc0006476-1491911889:1152..1697 | Clytia hemisphaerica | exon |
| TCONS_00044922-exon-sc0006476-1510915933:1152..1697 | TCONS_00044922-exon-sc0006476-1510915933:1152..1697 | Clytia hemisphaerica | exon |
| TCONS_00044922-exon-sc0006476-1575043694:1152..1697 | TCONS_00044922-exon-sc0006476-1575043694:1152..1697 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006476 | supercontig | sc0006476:792..1697 + |
Blast
The following BLAST results are available for this feature:
|
