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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044893 ID=TCONS_00044893|Name=TCONS_00044893|organism=Clytia hemisphaerica|type=transcript|length=720bp
AGGAGGCTGCATTCAATTTCATGAAAGAAGTCAGTAAACACGCTTCCAAT
CATCATCCCGATAATATACTGCTGACCTGCTTTCTTCGTATTCAAATCCG
AGAAGACTGGCAACGTCACTTGGGCATCCTGAAAAAGGAAACAAGAAATG
CTATTAGCAAACACGGCGATTTGTTAACATCGGAANCATCCCGATAATAT
ACTGCTGACCTGCTTTCTTCGTATCCAAATCCGAGAAGACTGGCAACGTC
ACTTGGGCATCCTGAAAAAGGAAACAAGAAATGCTATTAGCAAACACGGC
GATTTGTTAACATCGGAGAGATCGAATACTTTCGTTCCATTCAAACTGAT
GCgactaaaaccgcgaaaatggCAAAGCCAGCTAGAGAGGATATGTGATT
ATTTATTAATTGATGGAATTTGGGAGGAGATTCAAAATGGGATAATATTT
CACGACCTTGACGAAACCATCAACTACCCTCCCCCTCACCATTTTCGTAG
CTACACTATATCACAAGAACGCCAGtaactatttttttctttattcgtaC
AACGAAATTTTAATTCAACTTGACTTCCAGATAATGACTTCTACCTATCC
CAATACACTCTTTAGATGCAACATTTGCCACTAAATCGTCCAGCAGTAaa
ggaaaaattaagaaaagcaatgaaaATGCAGTCGAAATCATTAAAAAGCC
GATGCCATCAAAAACACGCA Run BLAST on NCBI transcript from alignment at sc0006405:901..1924- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044893 ID=TCONS_00044893|Name=TCONS_00044893|organism=Clytia hemisphaerica|type=transcript|length=1024bp|location=Sequence derived from alignment at sc0006405:901..1924- (Clytia hemisphaerica)
AGGAGGCTGCATTCAATTTCATGAAAGAAGTCAGTAAACACGCTTCCAAT
CATCATCCCGATAATATACTGCTGACCTGCTTTCTTCGTATTCAAATCCG
AGAAGACTGGCAACGTCACTTGGGCATCCTGAAAAAGGAAACAAGAAATG
CTATTAGCAAACACGGCGATTTGTTAACATCGGAANCATCCCGATAATAT
ACTGCTGACCTGCTTTCTTCGTATCCAAATCCGAGAAGACTGGCAACGTC
ACTTGGGCATCCTGAAAAAGGAAACAAGAAATGCTATTAGCAAACACGGC
GATTTGTTAACATCGGAGAGATCGAATACTTTCGTTCCATTCAAACTGAT
GCGACTAAAACCGCGAAAATGGCAAAGCCAGCTAGAGAGGATATGTGATT
ATTTATTAATTGATGGAATTTGGGAGGAGATTCAAAATGGGATAATATTT
CACGACCTTGACGAAACCATCAACTACCCTCCCCCTCACCATTTTCGTAG
CTACACTATATCACAAGAACGCCAGTAACTATTTTTTTCTTTATTCGTAC
AACGAAATTTTAATTCAACTTGACTTCCAGATAATGACTTCTACCTATCC
CAATACACTCTTTAGATGCAACATTTGCCACTAAATCGTCCAGCAGTAAA
GGAAAAATTAAGAAAAGCAATGAAAGTAAGTTTTTTTCTAATACCTTAAA
GGAAGAAATTTTGGCGGGAATTTAATTTGGCGGATGGCCAAAAAAGTTTT
TTCAGAGGGAATTTAATTTGGCGGATGGACAAAAAAAAAAAATTTGGCGG
ATGGCGGAAAAAAGAAATTTTGGCGGGAACTTAATTTGGCGGATTTCAGT
CAAATTTGCCAAATCCGCCAAATCCGCCAAATTTTCTTTCAAAATTTTTT
TTATTTAAAAAAGACAGTGATATTAGGAATTGATCCAATATACTCATTTG
ATATCTGACTATATAAATTTTTGTACTAGATGCAGTCGAAATCATTAAAA
AGCCGATGCCATCAAAAACACGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044893-exon-sc0006405-1575043694:1250..1924 | TCONS_00044893-exon-sc0006405-1575043694:1250..1924 | Clytia hemisphaerica | exon |
| TCONS_00044893-exon-sc0006405-1575043694:901..945 | TCONS_00044893-exon-sc0006405-1575043694:901..945 | Clytia hemisphaerica | exon |
| TCONS_00044893-exon-sc0006405-1510915933:1250..1924 | TCONS_00044893-exon-sc0006405-1510915933:1250..1924 | Clytia hemisphaerica | exon |
| TCONS_00044893-exon-sc0006405-1510915933:901..945 | TCONS_00044893-exon-sc0006405-1510915933:901..945 | Clytia hemisphaerica | exon |
| TCONS_00044893-exon-sc0006405-1491911889:1250..1924 | TCONS_00044893-exon-sc0006405-1491911889:1250..1924 | Clytia hemisphaerica | exon |
| TCONS_00044893-exon-sc0006405-1491911889:901..945 | TCONS_00044893-exon-sc0006405-1491911889:901..945 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006405 | supercontig | sc0006405:901..1924 - |
Blast
The following BLAST results are available for this feature:
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