TCONS_00044892 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044892
Unique NameTCONS_00044892
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length115

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044892 ID=TCONS_00044892|Name=TCONS_00044892|organism=Clytia hemisphaerica|type=transcript|length=115bp
GTAAAATTGGATAAAGAGCCTAAAATATCTCAATCTCgtcctaaaataaa
aacagaaagcAGGATTGAGGGTCAAGAAaccaaaaactttaatctgATGT
TATCTCAATTACCTC
Run BLAST on NCBI

transcript from alignment at sc0006402:324..438

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044892 ID=TCONS_00044892|Name=TCONS_00044892|organism=Clytia hemisphaerica|type=transcript|length=115bp|location=Sequence derived from alignment at sc0006402:324..438 (Clytia hemisphaerica)
GAGGTAATTGAGATAACATcagattaaagtttttggtTTCTTGACCCTCA
ATCCTgctttctgtttttattttaggacGAGATTGAGATATTTTAGGCTC
TTTATCCAATTTTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028491XLOC_028491Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044892-exon-sc0006402-1491911889:324..438TCONS_00044892-exon-sc0006402-1491911889:324..438Clytia hemisphaericaexon
TCONS_00044892-exon-sc0006402-1510915933:324..438TCONS_00044892-exon-sc0006402-1510915933:324..438Clytia hemisphaericaexon
TCONS_00044892-exon-sc0006402-1575043694:324..438TCONS_00044892-exon-sc0006402-1575043694:324..438Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0006402supercontigsc0006402:324..438 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044892 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top