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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044886 ID=TCONS_00044886|Name=TCONS_00044886|organism=Clytia hemisphaerica|type=transcript|length=419bp
ttttcaattgGTTTATATTGTtatacattttgttaaacacacgcaacaac
cttctactcagaatcatgttcgaactcgatactttttttcgggacaccct
gtatttcaCTTTACTTATTTACAGGTTTGAAGAGATGAAACTAGCTATTC
AACATTTGATGTTGATCGCAAGGCGAATCAAATTCTAACGATCACAGCTA
GGAGCAATCGATTTACAAAGCTCTGAAGTTCAATTGGAAATGAACGAAGC
CAAAGATATCAAAGACTTGGCAGCTAAACAACCTTTAGAAGTTCACGAAA
CGATAGCAGAATGCATGATCTTCGCCAATCATATAAgcttctttaaaatt
ttgtagtTACGCATTTCTCATGTGGATATTGTATAATGTTTTTAACacta
aacaattttcttttgacTT Run BLAST on NCBI transcript from alignment at sc0006389:612..1863- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044886 ID=TCONS_00044886|Name=TCONS_00044886|organism=Clytia hemisphaerica|type=transcript|length=1252bp|location=Sequence derived from alignment at sc0006389:612..1863- (Clytia hemisphaerica)
TTTTCAATTGGTTTATATTGTTATACATTTTGTTAAACACACGCAACAAC
CTTCTACTCAGAATCATGTTCGAACTCGATACTTTTTTTCGGGACACCCT
GTATTTCACTTTACTTATTTACAGGTTTGAAGAGATGAAACTAGCTATTC
AACATTTGATGTTGATCGCAAGGCGAATCAAATTCTAACGATCACAGCTA
GGTATGCTTATTTTTTCATCTTTTAAACAAAAAAATCAGTTATTAAAACT
ATTTGGCAAAACCATAGAAAGAGTTTACGGCTCAAACCAGCAAACCAAAA
ACTGATCGGTTTTTTCCAAACCAAAACTGATTTTTCTGAATTTTTAGCTA
TTACGGTATCATTTTTTCATAAATTAATTATAAAGTTGTATTTTAATTAA
GTACTACTCGACCTGATGCCTACCACAATTAAAAAAATTATCGATTTCAA
ATCTTTTAACCCACATCCATTATAGTGTCATTTTAGTCCAGGAGCCGCAA
CCGAAAAACTGTCTTTACGGTCATGCAGTGTGTCCGGAAAAAAGCGGGAA
CAGATTTTAATTTGAAAATTATCAAAATTTCTACCAGAATTTAGACCTCC
CCCCCCCATTTTTTTCAAAACAACATTTTAAATACCTTAGGGAAGGGAGT
TGATCATTCTAAACCTCAGTGCGATGATTACTTTTTTTGCTTCGTTTAAA
ATCTGTTCTTCTTTTCATAAGCACACTGTATAAAGCTCAGTCGGGACTGT
AATGTTTGACTTTGGTCTACAATTTTTGTAGGAGCAATCGATTTACAAAG
CTCTGAAGTTCAATTGGAAATGAACGAAGCCAAAGATATCAAAGACTTGG
CAGCTAAACAAGTATGTTGGTCAGCCAGAATTCATTATTTTTCAGTAAAA
TCGCAAATTGCTTTTCGCTAGTATAATTCTTGACATGTACTAACTAGCAC
TATAATTGATAGCAAGTGAATCAATTACCTTTAAAGAGTTTTTATTGGTA
TTACATAATGTCGTTATCGGATGCTCCGTTGCAAACCTTGGAAAATTATG
GTGTATCATTAAAATTCTTAAAGTAATCTTTTAAACTACTCTGATCCTTA
TAATTCTATTTCAGCCTTTAGAAGTTCACGAAACGATAGCAGAATGCATG
ATCTTCGCCAATCATATAAGCTTCTTTAAAATTTTGTAGTTACGCATTTC
TCATGTGGATATTGTATAATGTTTTTAACACTAAACAATTTTCTTTTGAC
TT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044886-exon-sc0006389-1575043694:1663..1863 | TCONS_00044886-exon-sc0006389-1575043694:1663..1863 | Clytia hemisphaerica | exon |
| TCONS_00044886-exon-sc0006389-1575043694:1003..1082 | TCONS_00044886-exon-sc0006389-1575043694:1003..1082 | Clytia hemisphaerica | exon |
| TCONS_00044886-exon-sc0006389-1575043694:612..749 | TCONS_00044886-exon-sc0006389-1575043694:612..749 | Clytia hemisphaerica | exon |
| TCONS_00044886-exon-sc0006389-1510915933:1663..1863 | TCONS_00044886-exon-sc0006389-1510915933:1663..1863 | Clytia hemisphaerica | exon |
| TCONS_00044886-exon-sc0006389-1510915933:1003..1082 | TCONS_00044886-exon-sc0006389-1510915933:1003..1082 | Clytia hemisphaerica | exon |
| TCONS_00044886-exon-sc0006389-1510915933:612..749 | TCONS_00044886-exon-sc0006389-1510915933:612..749 | Clytia hemisphaerica | exon |
| TCONS_00044886-exon-sc0006389-1491911889:1663..1863 | TCONS_00044886-exon-sc0006389-1491911889:1663..1863 | Clytia hemisphaerica | exon |
| TCONS_00044886-exon-sc0006389-1491911889:1003..1082 | TCONS_00044886-exon-sc0006389-1491911889:1003..1082 | Clytia hemisphaerica | exon |
| TCONS_00044886-exon-sc0006389-1491911889:612..749 | TCONS_00044886-exon-sc0006389-1491911889:612..749 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006389 | supercontig | sc0006389:612..1863 - |
Blast
The following BLAST results are available for this feature:
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