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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044864 ID=TCONS_00044864|Name=TCONS_00044864|organism=Clytia hemisphaerica|type=transcript|length=173bp
GATGAAAATCTTATGAGTTTCATTAAAGGagggttgaaaatcaaaaatgc
ctATGGAATATACagAAACTGTATGACTGCATTAGAGGAGAAATCGAAGA
CTTTACAATTATCACATACTCGGAGTGATTTTGAAAGTGGTGTTTATATG
GGTATCGGTACCTTTAATTTGGT Run BLAST on NCBI transcript from alignment at sc0006350:399..2001- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044864 ID=TCONS_00044864|Name=TCONS_00044864|organism=Clytia hemisphaerica|type=transcript|length=1603bp|location=Sequence derived from alignment at sc0006350:399..2001- (Clytia hemisphaerica)
GATGAAAATCTTATGAGTTTCATTAAAGGAGGGTTGAAAATCAAAAATGC
CTATGGAATATACAGGTATTTATTTTTATAAGAAAGTGTATTCCGGAATT
GAAAGCGGAAGAGATAGAGCTATTCCAGAAATAGTCTGTACCGCTTATGT
TGAGGAGGTGTGACGTTAGGGTGGTCTGGAAAATAAAAAATCCAGGATAG
TCTGGTTTTGAATGATAAAGTCAATAAAATCGGGTTGAAAATCCAGGGTA
GTCCAAAGAAATGGGAGAATAAAATCCAGGGGGTCACCTTTTTAAGAAAA
TATCTCCTTAATATAGGGGGTACAATTTCTATTGGAATAGCCCATTTTTT
AGTGAAGTATTTTTAAATAGAAATAAGGTCCCAATAAATTCCAGGTTTAA
TAATGAGGATATCTATTTATATTATAACCTATGTTCTAGTTTTTGCAGTT
GACGCTCTCTAATTCGACGTTATTTGATACATTCCATTATTCGATATTAC
TGAAGGTCACCGTCAACAAGAAACTCTCTTAAACGACGCTCTATTATTCG
TTCTTATTCGATAAAAATCAAAATTCCCTTCGAAAAATCGAATTGGAGCG
CGTCGACTTAAAGGTTTTATTTTTACATAAATGTCCCATTTCATATCAAA
CACATATTTCATATTAGGACAGTGTCTCCAAATTGATATATGTGCTGATA
TAAACACATAAATGCTTTTCTGTTCCTCTTTCTGACCAATCTTGCTCCAC
ATCCGTGTCAATTCAATGTGAAAAAGCTTTTAATTAAAACTGATGAGTAA
GCAAACCGTATTACTCTGATTTAAAAACAAGACCTTTAACTACACGATAG
AATTCCAGGTTTTTCCAAGGAGATGTGACGTAAACTATAAACTCATCAGG
TTGCACGCATCTCTTCTAATATTTTTTAATATAGGGGTTGGGTATCATGT
ATAAAATTCCCGTCCTGTGTTTGTGTTTTTGAGTTTTCGTGCTATATGAG
GGATTTTCAAATTTTATTAAGTTTTAATGAAAAGTTTGAATAGCTAGAGG
TCAATACAATCATTGGATTTCTGAAGCTTTTTAAGAAAATTGAAACAGGT
TACCCCAAAATTGGGGTAACTCTCGAACGCGAATTTTATAAACGATACGC
ATTCCCTATATCGAAATCAATTATTGGGATGCACGCAGCCTTTAAACTTA
ACACCCAGCAAGCACAAGACGTTGTTTTAACGTTCAAATAACGTTATTTG
GACGTTAAGAATGTCAAATGGACGTTGATACGACGTCGAGTGCCGACTGG
GCAAGTGATCTCTTCTTCAGAGTTAAAAGTTCTTCCGTTTCAAACGGATT
TCCGTCTCAGTGAAGTGTATAAAAAAAGGCTTTCCGATCCTAAAATTGTG
CATAATTCACCAAAGGTCAAGGATTTGTGTAAAATCCAATTTTCCGTCTC
CCAAGAAAAACTTTTCTTTGACTACATGCTTTTTATCATTTGTAGAAACT
GTATGACTGCATTAGAGGAGAAATCGAAGACTTTACAATTATCACATACT
CGGAGTGATTTTGAAAGTGGTGTTTATATGGGTATCGGTACCTTTAATTT
GGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044864-exon-sc0006350-1575043694:1937..2001 | TCONS_00044864-exon-sc0006350-1575043694:1937..2001 | Clytia hemisphaerica | exon |
| TCONS_00044864-exon-sc0006350-1575043694:399..506 | TCONS_00044864-exon-sc0006350-1575043694:399..506 | Clytia hemisphaerica | exon |
| TCONS_00044864-exon-sc0006350-1510915933:1937..2001 | TCONS_00044864-exon-sc0006350-1510915933:1937..2001 | Clytia hemisphaerica | exon |
| TCONS_00044864-exon-sc0006350-1510915933:399..506 | TCONS_00044864-exon-sc0006350-1510915933:399..506 | Clytia hemisphaerica | exon |
| TCONS_00044864-exon-sc0006350-1491911889:1937..2001 | TCONS_00044864-exon-sc0006350-1491911889:1937..2001 | Clytia hemisphaerica | exon |
| TCONS_00044864-exon-sc0006350-1491911889:399..506 | TCONS_00044864-exon-sc0006350-1491911889:399..506 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006350 | supercontig | sc0006350:399..2001 - |
Blast
The following BLAST results are available for this feature:
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