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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044830 ID=TCONS_00044830|Name=TCONS_00044830|organism=Clytia hemisphaerica|type=transcript|length=834bp
GCCCAGCCTAACCCCAGACCCGGCCACGGAGGAGGTCAAGGACACACCCC
GCAATGACGGGAAGCCAGCCCAGCCCTCCCACAGACCCTGTGGTGGAGGA
GGTCTCTGAGGACACGCCCCGCGCCCACGGGGAGCCAGCCCAGTCTACCC
ACAGACCCGGCCACGGAGGAGGTCAAGGACACACCCCGCAATGACGGGAA
GCCAGCCCAGCCCTCCCACAGAACCTGCCACGGAGGAGGTCTCTGAGGAC
ACCCCCCGCAATGACGGGCCAGCCCAGCCTACCCACAGTCCCGGCCACGG
AGGAGGTCAAGGACACACCCCGCAATGACGGGCCctttattgaaaggaaa
agcGAAATAATTTGGATCCCCAAAGCTGCATAATGCTATCAATTCTAGCC
ATTGgtaacttcaaaaaaaaacaaacttgttatTGGTCGTACCTCCTTTA
CAGTCAACTCTATCCTGGCCCTTTCTACTACATGTTAGCCAGTTGTGGGA
TGCCAAATATAATTCCTTGATAACTTGAGAATTCTTGCCCTCGTCTAAGT
CTTGACCAGCTATCTGTACAACTGATGCTCTACTTGTGATAATGACTCGA
TAAAAACATACACACCCTAGGAACCATATATAGGAACAAAAAGAACAtat
aatagaaaataaaatattatcttataaattaatttgattttataCTTAAA
TCTATCGAAAACGATATGAAATACTTAAACTTATATATAAAATTGACGTG
AATCAAGAAATCATTCTTGCGTCATGATTTATTACTGTTTAACTAGGCCC
ATACCCCTCTCTAGGGAAACAATATATGTAAACT Run BLAST on NCBI transcript from alignment at sc0006290:422..1465+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044830 ID=TCONS_00044830|Name=TCONS_00044830|organism=Clytia hemisphaerica|type=transcript|length=1044bp|location=Sequence derived from alignment at sc0006290:422..1465+ (Clytia hemisphaerica)
GCCCAGCCTAACCCCAGACCCGGCCACGGAGGAGGTCAAGGACACACCCC
GCAATGACGGGAAGCCAGCCCAGCCCTCCCACAGACCCTGTGGTGGAGGA
GGTCTCTGAGGACACGCCCCGCGCCCACGGGGAGCCAGCCCAGTCTACCC
ACAGACCCGGCCACGGAGGAGGTCAAGGACACACCCCGCAATGACGGGAA
GCCAGCCCAGCCCTCCCACAGAACCTGCCACGGAGGAGGTCTCTGAGGAC
ACACCCCGCAATGACGGGGAGCCAGCCCAGCCTACCCCCAGACCCGGCCA
CGGAGGAGGTCTCTGAGGACACGCCCCGCGCCCACGGGGAGCCAGCCCAG
TCTACCCACAGACCCGGCCACGGAGGAGGTCTCTGAGGACACGCCCCGCG
CCCACGGGGAGCCAGCCCAGTCTACCCACAGACCCGGCCACGGAGGAGGT
CTCTGAGGACACCCCCCGCAATGACGGGCCAGCCCAGCCTACCCACAGTC
CCGGCCACGGAGGAGGTCAAGGACACACCCCGCAATGACGGGCCctttat
tgaaaggaaaagcGAAATAATTTGGATCCCCAAAGCTGCATAATGCTATC
AATTCTAGCCATTGgtaacttcaaaaaaaaacaaacttgttatTGGTCGT
ACCTCCTTTACAGTCAACTCTATCCTGGCCCTTTCTACTACATGTTAGCC
AGTTGTGGGATGCCAAATATAATTCCTTGATAACTTGAGAATTCTTGCCC
TCGTCTAAGTCTTGACCAGCTATCTGTACAACTGATGCTCTACTTGTGAT
AATGACTCGATAAAAACATACACACCCTAGGAACCATATATAGGAACAAA
AAGAACAtataatagaaaataaaatattatcttataaattaatttgattt
tataCTTAAATCTATCGAAAACGATATGAAATACTTAAACTTATATATAA
AATTGACGTGAATCAAGAAATCATTCTTGCGTCATGATTTATTACTGTTT
AACTAGGCCCATACCCCTCTCTAGGGAAACAATATATGTAAACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044830-exon-sc0006290-1491911889:422..659 | TCONS_00044830-exon-sc0006290-1491911889:422..659 | Clytia hemisphaerica | exon |
| TCONS_00044830-exon-sc0006290-1510915933:422..659 | TCONS_00044830-exon-sc0006290-1510915933:422..659 | Clytia hemisphaerica | exon |
| TCONS_00044830-exon-sc0006290-1575043694:422..659 | TCONS_00044830-exon-sc0006290-1575043694:422..659 | Clytia hemisphaerica | exon |
| TCONS_00044830-exon-sc0006290-1491911889:870..1465 | TCONS_00044830-exon-sc0006290-1491911889:870..1465 | Clytia hemisphaerica | exon |
| TCONS_00044830-exon-sc0006290-1510915933:870..1465 | TCONS_00044830-exon-sc0006290-1510915933:870..1465 | Clytia hemisphaerica | exon |
| TCONS_00044830-exon-sc0006290-1575043694:870..1465 | TCONS_00044830-exon-sc0006290-1575043694:870..1465 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006290 | supercontig | sc0006290:422..1465 + |
Blast
The following BLAST results are available for this feature:
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