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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044827 ID=TCONS_00044827|Name=TCONS_00044827|organism=Clytia hemisphaerica|type=transcript|length=283bp
TAGTTATTGATCCACCTCGGCTGCAACACGACCCGTTACCAGCctctcaa
aattctgcaaagCTCGATCAAGaTGCCGATCAGTCTCAATTAAAAGTAAA
CATGTTGTCCGTATCTCAAAATTCTGTAAAACTCAATCAAGATATTAACC
AGTCTACGTTCCAACCAAACCCATCGGCACCTATTAGTAACTCCACAAAC
ATCGATCAAGCACTCCCTCTGTTGTAATTGTCGCAGCCGTTGCAACACCG
ATTCGCCGTTGTTGGTGCCGACGTCAATGCAGG Run BLAST on NCBI transcript from alignment at sc0006285:357..1207- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044827 ID=TCONS_00044827|Name=TCONS_00044827|organism=Clytia hemisphaerica|type=transcript|length=851bp|location=Sequence derived from alignment at sc0006285:357..1207- (Clytia hemisphaerica)
TAGTTATTGATCCACCTCGGCTGCAACACGACCCGTTACCAGCCTCTCAA
AATTCTGCAAAGCTCGATCAAGGTACATTTGTCTTAATACAAAATTATAG
AGACTCCCATTTTGATGTAATCATGTATTGGCAAGATGCTATGTTTTTAG
TAATTCTGTTCTAACTGTATTCGACACATCTTCGAATTCTTTTCAGAATG
ATTCTATTTGACGAATGCGCTGTATCGATCAAATATATCTATCTATTTGC
AAATTTCAATAAAAAGACTTTTCTTTTTTAATAGATGCCGATCAGTCTCA
ATTAAAAGTAAACATGTTGTCCGTATCTCAAAATTCTGTAAAACTCAATC
AAGGTACTTTAGTCTTTTCTTTGCTTCTTTTTGTAGAGATTTTTTTGATG
ATTTCAGTACAAAGATCAATGTTCCAAACCTCTGAAATTTCAGTTCATAA
AAATATTTTTTTCTATTTATAATAGATATTAACCAGTCTACGTTCCAACC
AAACCCATCGGCACCTATTAGTAACTCCACAAACATCGATCAAGGTACAT
TTGTCTTCTTTTATTAGTAAAAGTCACACTGGGTCTATGCAGGCATAATT
TTTATAAAGGGATAAATAGAATGCTTCATTAGGCGCTGCTTAAGTTCTGT
AACGTAAAAATTTAATGTTAAATTTTCAACTGAAAACCTTTTTAAGGAGC
TTTGATCCTGCAATGATTACACGGATTTGTGTTGCTTCATTGCTAGTTAA
CGCTAAAATTATACGTTTCTTTTTTTAGCACTCCCTCTGTTGTAATTGTC
GCAGCCGTTGCAACACCGATTCGCCGTTGTTGGTGCCGACGTCAATGCAG
G
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044827-exon-sc0006285-1575043694:1136..1207 | TCONS_00044827-exon-sc0006285-1575043694:1136..1207 | Clytia hemisphaerica | exon |
| TCONS_00044827-exon-sc0006285-1575043694:855..923 | TCONS_00044827-exon-sc0006285-1575043694:855..923 | Clytia hemisphaerica | exon |
| TCONS_00044827-exon-sc0006285-1575043694:664..732 | TCONS_00044827-exon-sc0006285-1575043694:664..732 | Clytia hemisphaerica | exon |
| TCONS_00044827-exon-sc0006285-1575043694:357..429 | TCONS_00044827-exon-sc0006285-1575043694:357..429 | Clytia hemisphaerica | exon |
| TCONS_00044827-exon-sc0006285-1510915933:1136..1207 | TCONS_00044827-exon-sc0006285-1510915933:1136..1207 | Clytia hemisphaerica | exon |
| TCONS_00044827-exon-sc0006285-1510915933:855..923 | TCONS_00044827-exon-sc0006285-1510915933:855..923 | Clytia hemisphaerica | exon |
| TCONS_00044827-exon-sc0006285-1510915933:664..732 | TCONS_00044827-exon-sc0006285-1510915933:664..732 | Clytia hemisphaerica | exon |
| TCONS_00044827-exon-sc0006285-1510915933:357..429 | TCONS_00044827-exon-sc0006285-1510915933:357..429 | Clytia hemisphaerica | exon |
| TCONS_00044827-exon-sc0006285-1491911889:1136..1207 | TCONS_00044827-exon-sc0006285-1491911889:1136..1207 | Clytia hemisphaerica | exon |
| TCONS_00044827-exon-sc0006285-1491911889:855..923 | TCONS_00044827-exon-sc0006285-1491911889:855..923 | Clytia hemisphaerica | exon |
| TCONS_00044827-exon-sc0006285-1491911889:664..732 | TCONS_00044827-exon-sc0006285-1491911889:664..732 | Clytia hemisphaerica | exon |
| TCONS_00044827-exon-sc0006285-1491911889:357..429 | TCONS_00044827-exon-sc0006285-1491911889:357..429 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006285 | supercontig | sc0006285:357..1207 - |
Blast
The following BLAST results are available for this feature:
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