TCONS_00044772 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044772
Unique NameTCONS_00044772
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length174

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044772 ID=TCONS_00044772|Name=TCONS_00044772|organism=Clytia hemisphaerica|type=transcript|length=174bp
TTTTGTTGCTAGCCTTGATCTTAAATTTGTTGTATAACTCTTTGGTACTC
ATTTTAGATGACTTTCAAGTGAAAAATTACTAAGAAATGTAAAGAATATA
CAAAAAATTTATACCTTTTCAGTCAGTTTTTGAAAGAGAGTGACTTCTTG
ATCGTTGATCAACCACGAGTCTTC
Run BLAST on NCBI

transcript from alignment at sc0006188:2176..2349

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044772 ID=TCONS_00044772|Name=TCONS_00044772|organism=Clytia hemisphaerica|type=transcript|length=174bp|location=Sequence derived from alignment at sc0006188:2176..2349 (Clytia hemisphaerica)
GAAGACTCGTGGTTGATCAACGATCAAGAAGTCACTCTCTTTCAAAAACT
GACTGAAAAGGTATAAATTTTTTGTATATTCTTTACATTTCTTAGTAATT
TTTCACTTGAAAGTCATCTAAAATGAGTACCAAAGAGTTATACAACAAAT
TTAAGATCAAGGCTAGCAACAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028384XLOC_028384Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044772-exon-sc0006188-1491911889:2176..2349TCONS_00044772-exon-sc0006188-1491911889:2176..2349Clytia hemisphaericaexon
TCONS_00044772-exon-sc0006188-1510915933:2176..2349TCONS_00044772-exon-sc0006188-1510915933:2176..2349Clytia hemisphaericaexon
TCONS_00044772-exon-sc0006188-1575043694:2176..2349TCONS_00044772-exon-sc0006188-1575043694:2176..2349Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0006188supercontigsc0006188:2176..2349 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044772 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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