TCONS_00044741 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044741
Unique NameTCONS_00044741
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length225

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044741 ID=TCONS_00044741|Name=TCONS_00044741|organism=Clytia hemisphaerica|type=transcript|length=225bp
TGACACATCTTAACTTTTCCTCCTTATCAGTACACAATATCCAAACATTA
AACATGACTACTCTCTCTTGGAGACAATTGGATTATCTTTGTAACGCAAG
GTCTGTAATAGATAATTATACATAATATAAATATATAATATGAATAAAGT
TAAACGAATTACATAATCACAAGaaatttattatatattatCTATAAACA
AGATCAATTGTATGACGAACAAACA
Run BLAST on NCBI

transcript from alignment at sc0006121:1..225

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044741 ID=TCONS_00044741|Name=TCONS_00044741|organism=Clytia hemisphaerica|type=transcript|length=225bp|location=Sequence derived from alignment at sc0006121:1..225 (Clytia hemisphaerica)
TGTTTGTTCGTCATACAATTGATCTTGTTTATAGataatatataataaat
ttCTTGTGATTATGTAATTCGTTTAACTTTATTCATATTATATATTTATA
TTATGTATAATTATCTATTACAGACCTTGCGTTACAAAGATAATCCAATT
GTCTCCAAGAGAGAGTAGTCATGTTTAATGTTTGGATATTGTGTACTGAT
AAGGAGGAAAAGTTAAGATGTGTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028354XLOC_028354Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044741-exon-sc0006121-1491911889:1..225TCONS_00044741-exon-sc0006121-1491911889:1..225Clytia hemisphaericaexon
TCONS_00044741-exon-sc0006121-1510915933:1..225TCONS_00044741-exon-sc0006121-1510915933:1..225Clytia hemisphaericaexon
TCONS_00044741-exon-sc0006121-1575043694:1..225TCONS_00044741-exon-sc0006121-1575043694:1..225Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0006121supercontigsc0006121:1..225 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.6064	30.7541	14.9422	6.55188	0	0	0	7.12771	1.07258	1.23721	0	1.6092	0.943709	0	0	0	0	0.903006	0	2.54451	2.33245	0	7.41411	0	1.22797	2.19187	6.51168	8.63213	11.6513	2.58674
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044741 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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