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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044729 ID=TCONS_00044729|Name=TCONS_00044729|organism=Clytia hemisphaerica|type=transcript|length=259bp
AGATAACACCCCTTTTGATCCAACCCAACCAATCGCAATGTCTATTGATG
GAATTTATGTACATTGGCCTTGTCCTGAGGATGTTGAACATACAAAAATA
TTAATAGAGAATGGAAGACAATGCCTACATACATCCACAATGTTGAACCA
GGGTTGGCATCGGCGATGGGAAGAGTGGTGTATCAAGCAATGGCATGTTC
ATTCTTACAATAGGGTAACAGGTGAAATGTATGAAAGATATGATGGCCGG
TGGTTTATG Run BLAST on NCBI transcript from alignment at sc0006096:1247..2600- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044729 ID=TCONS_00044729|Name=TCONS_00044729|organism=Clytia hemisphaerica|type=transcript|length=1354bp|location=Sequence derived from alignment at sc0006096:1247..2600- (Clytia hemisphaerica)
AGATAACACCCCTTTTGATCCAACCCAACCAATCGCAATGTCTATTGATG
GAATTTATGTACATTGGCCTTGTCCTGAGGATGTTGGTAGGTTATACTTC
CTTTTTTTTGGTTTAATTGAATGTTTTTTTTCTATAAGCATTACACTTAT
AAGCATATCTAGGTTTAGATATGATAAAAATTTAAACATGTACTAAGCAT
GTGAGCCCTGATCCTACGAAAAATGTATTTTCCTGATTTTGGCTGGGAAA
ATTCCCTGTTGTATTTTAGCAAACTCCCGCCACCTTTATTTTCCCACCTT
CTGACATGATCAACTAACACACCAGTTTGCTATTTATTAAATGTACCCGA
AAGTAAGAGAATTAGATTTACAAAATTTTGCCTTATCGCGCAAAGGGATC
GTAGAAAGAGGTCTGGTGCCAAAAGTCTTATTATGTTACTCTTGGCGCAA
TAACTGCAAATAATTACGTGAAAATGAAGCCCTTCTTCTCGACACATAAT
AGGATAGCTCCACTTTCTCTACAATGCGATATTGGTCAGCTGCTTCAGAG
TTTTTGCTGTAAACTGATATTTTGATCACAGTGAACTCTTTCTATANTAC
GTGAAAATGAAGCCCTTCTTCTCGACACATAATAGGATAGCTCCACTTTC
TCTACAATACGATATTGGTCAGCTGCTTCAGAGTTTTTGCTGTAAACTGA
TATTTTGATCACAGTGAACTCTTTCTATAATTCGAACCTCTATTACTCGA
ATTTTTCTATAATTAGAACTCAATTATTGCCCCCCCCCTTCAACTTGGAA
GTATGGGAAGTTCTCTCTGTAATTCTAATCTTTCTCTAACACAAATAAAA
TTTTTGGTACCTTGAAGATCGAATTAGAGAGAGAGAGTCAACTATGTGTC
TCCATATTTAGTGCGGGGGCTTAGTGGATTATAAATCGAACGTTAAGTGT
TGTGTTGTTGGTGGAGCTTTGTTGTTGCTTCTCAGAATTTAGCCAAAACC
CTAAGGAAAATGAAATAAAGAAAGAGGCTGATTCGTGGACTTTAATCCAC
GCAAAATATTTCGATTCTAAATTACCACAAAAAAAGGTCGACACAAAAAT
TAATCCACAGTTTTTAAATGTTATTATTTGATAAAAACACAATTTAATGG
GTTATATTTTAAATCTCATTTTTTTCCACAGAACATACAAAAATATTAAT
AGAGAATGGAAGACAATGCCTACATACATCCACAATGTTGAACCAGGGTT
GGCATCGGCGATGGGAAGAGTGGTGTATCAAGCAATGGCATGTTCATTCT
TACAATAGGGTAACAGGTGAAATGTATGAAAGATATGATGGCCGGTGGTT
TATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044729-exon-sc0006096-1575043694:2515..2600 | TCONS_00044729-exon-sc0006096-1575043694:2515..2600 | Clytia hemisphaerica | exon |
| TCONS_00044729-exon-sc0006096-1575043694:1247..1419 | TCONS_00044729-exon-sc0006096-1575043694:1247..1419 | Clytia hemisphaerica | exon |
| TCONS_00044729-exon-sc0006096-1510915933:2515..2600 | TCONS_00044729-exon-sc0006096-1510915933:2515..2600 | Clytia hemisphaerica | exon |
| TCONS_00044729-exon-sc0006096-1510915933:1247..1419 | TCONS_00044729-exon-sc0006096-1510915933:1247..1419 | Clytia hemisphaerica | exon |
| TCONS_00044729-exon-sc0006096-1491911889:2515..2600 | TCONS_00044729-exon-sc0006096-1491911889:2515..2600 | Clytia hemisphaerica | exon |
| TCONS_00044729-exon-sc0006096-1491911889:1247..1419 | TCONS_00044729-exon-sc0006096-1491911889:1247..1419 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006096 | supercontig | sc0006096:1247..2600 - |
Blast
The following BLAST results are available for this feature:
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