|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044554 ID=TCONS_00044554|Name=TCONS_00044554|organism=Clytia hemisphaerica|type=transcript|length=1149bp
TTCACCTTGAAATGAACCAATTCCAATGTAAATAGCCGAAATGTTGGTTA
GAATCAACCCAAAGAATAGTTAAAcatattttcttttataaaacatAAAT
GTGAACGTTCATTATCCAATAAAAATActataaatttgatattttaaggT
ATTTTCATAAAGCTAGAAGCGACATCATGGCAGTAAAATGGTTCAAAGAA
ATTACATTAAAATGGTTGAAAAGCCCGCCCTAAATAAATCCAGATGTTCA
AAGTACTCAATATAAAAAATGAGTCTTGATAAGGGATAACGAAAAACGAT
TTCCTCTATCAAATTTCCGATCATTCTAAACTTTTCTGATCATTTCCTTT
ACAAAGAGACAGCAGCAAATTGCTTTCAGAAAGCATGTATAAAGTCACAG
TTGCATGAAGTGAATTCGTGTCAAACCATTGCTGGCCTCTttcccaaaat
ttgaaaagaatccAGTGAAATTTTAGTAAACTCTAACTTATCTTTCTGTA
TTTGGAACTAGTTCTTGTCCTTCTCTACGTCAAAAGAGCTCCATAAAAAC
TCAAAGCTCTTTACGTCGGAAACACCAAAAAGTAGACTTGTGTTATTTTT
CGAACTTAAGAGTTGCATGTTGTCCGATCGAAAAGACTCTTTAAAGGTTT
CAGTTTATCATAAGTGTTCCGGTTTTATATCATACACGTAtcttaaaaat
ttgttttttttgtctttctgaccaatattttcatttaaaaatctcaaact
tttaaatcatcaaaaaatttcatctcttgAAGATTGAATTAGAGATCAAC
AACAATTAGATCATTTCgtccgaaaattgattttgtccGAGAAGTCAAAT
AATCTGAGACAAAACATTGCGTAGTCTGCCTAATAGACTCTTAAGTAGTA
ATATTAACGTCATGGTAATTGAATAAAGATATTTCTTactcaattttcag
aaaaagaaaaatacttcttgggtaATATAAAATGTTCcagtattttttca
atttttatttacataaatacaaaataaattaaaaaacacTTAACTATTAT
AAAACGGTGATGTAACGATAGCAACGCAAAATCAAAACGAGGCTGTGATA
TAAGCCAAtcaattcaaatcaaatgataatcgataaacaatcgcaTACC Run BLAST on NCBI transcript from alignment at sc0005767:2184..3332 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044554 ID=TCONS_00044554|Name=TCONS_00044554|organism=Clytia hemisphaerica|type=transcript|length=1149bp|location=Sequence derived from alignment at sc0005767:2184..3332 (Clytia hemisphaerica)
GGTAtgcgattgtttatcgattatcatttgatttgaattgaTTGGCTTAT
ATCACAGCCTCGTTTTGATTTTGCGTTGCTATCGTTACATCACCGTTTTA
TAATAGTTAAgtgttttttaatttattttgtatttatgtaaataaaaatt
gaaaaaatactgGAACATTTTATATtacccaagaagtatttttctttttc
tgaaaattgagtAAGAAATATCTTTATTCAATTACCATGACGTTAATATT
ACTACTTAAGAGTCTATTAGGCAGACTACGCAATGTTTTGTCTCAGATTA
TTTGACTTCTCggacaaaatcaattttcggacGAAATGATCTAATTGTTG
TTGATCTCTAATTCAATCTTcaagagatgaaattttttgatgatttaaaa
gtttgagatttttaaatgaaaatattggtcagaaagacaaaaaaaacaaa
tttttaagaTACGTGTATGATATAAAACCGGAACACTTATGATAAACTGA
AACCTTTAAAGAGTCTTTTCGATCGGACAACATGCAACTCTTAAGTTCGA
AAAATAACACAAGTCTACTTTTTGGTGTTTCCGACGTAAAGAGCTTTGAG
TTTTTATGGAGCTCTTTTGACGTAGAGAAGGACAAGAACTAGTTCCAAAT
ACAGAAAGATAAGTTAGAGTTTACTAAAATTTCACTggattcttttcaaa
ttttgggaaAGAGGCCAGCAATGGTTTGACACGAATTCACTTCATGCAAC
TGTGACTTTATACATGCTTTCTGAAAGCAATTTGCTGCTGTCTCTTTGTA
AAGGAAATGATCAGAAAAGTTTAGAATGATCGGAAATTTGATAGAGGAAA
TCGTTTTTCGTTATCCCTTATCAAGACTCATTTTTTATATTGAGTACTTT
GAACATCTGGATTTATTTAGGGCGGGCTTTTCAACCATTTTAATGTAATT
TCTTTGAACCATTTTACTGCCATGATGTCGCTTCTAGCTTTATGAAAATA
ccttaaaatatcaaatttatagTATTTTTATTGGATAATGAACGTTCACA
TTTatgttttataaaagaaaatatgTTTAACTATTCTTTGGGTTGATTCT
AACCAACATTTCGGCTATTTACATTGGAATTGGTTCATTTCAAGGTGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044554-exon-sc0005767-1491911889:2184..3332 | TCONS_00044554-exon-sc0005767-1491911889:2184..3332 | Clytia hemisphaerica | exon |
| TCONS_00044554-exon-sc0005767-1510915933:2184..3332 | TCONS_00044554-exon-sc0005767-1510915933:2184..3332 | Clytia hemisphaerica | exon |
| TCONS_00044554-exon-sc0005767-1575043694:2184..3332 | TCONS_00044554-exon-sc0005767-1575043694:2184..3332 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005767 | supercontig | sc0005767:2184..3332 . |
Blast
The following BLAST results are available for this feature:
|
