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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044551 ID=TCONS_00044551|Name=TCONS_00044551|organism=Clytia hemisphaerica|type=transcript|length=239bp
GTTGAAGATTTTATATGCACTCTTTTGATAGTTATCCCTAATGCTGGAAT
ACTTGAACTGTTGAATTTTGTCATCGATCATATGTCAAAGCCGTCCATCG
ATCAGAATGATTTGGATTCTTGGTCAGAGAACATGAAAGAATTAGCTGCC
TATCCGAATGTACATTGTAAAATATCTGGCCTTTCGATACATGCAGATTC
AAGCAAGCCACTCGCACCACAAATCACACCATATATTAA Run BLAST on NCBI transcript from alignment at sc0005763:513..2300+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044551 ID=TCONS_00044551|Name=TCONS_00044551|organism=Clytia hemisphaerica|type=transcript|length=1788bp|location=Sequence derived from alignment at sc0005763:513..2300+ (Clytia hemisphaerica)
GTTGAAGATTTTATATGCACTCTTTTGATAGTTATCCCTAATGCTGGAAT
ACTTGAACTGTAAGTCCGATATGTCAATCAGAATCTCTTTTCGAAATAAA
TGTTAAATAATAGTATGATTTTTCATCACGATTGAATTTGGATTGAATTT
GGATTATGTTAAATTTGATGCAAATGTTTGctgcgaccgtagtgcagtgg
tagagcatccggctacggtgccgggtcataccaaagattcccaaaaaggt
acttgatgcctctccgCTCGataatgctcagcaattaagagaaggatcaa
gggtaaaaggagcaatccagggagaaaaagTGGCGTNAGCTCCGCTCGat
aatgctcagcaattaagaaaaggatcaagggtaaaaGGAGCAATCTAGGG
AGGAAGAGTGGCGTATTCCCCTACCcttgggtagatagctatcgaaagaa
gaaccttcgggtcgcctccgactgcggtcgaaAACCTACTTCTTGATGTA
GGTTTAAGCTCCCCTGGGATCCAATTAATCAAATTTACTTATCGCTGGGC
TTCTTAGTGTGACCCAAAGGTGACACAAATCTCTAATGTAAATTTCATTT
TAGGTTGAATTTTGTCATCGATCATATGTCAAAGCCGTCCATCGATCAGA
ATGATTTGGATTCTTGGTCAGAGAACATGAAAGAATTAGCTGCCTATCCG
AATGTACATTGTAAAATGTAAGATCATGCCTCATAATGAAACTTGATTTA
TCATGTGCGTAATGTAATGATGAGTGTAAGACGTCATCATTGGTTGTAAT
TGTCAGTGAACTTCGATATTTGAAATTGACCAGTGGTAGATATTGATAAT
TGAAGATGattcacaaaattttgcttcagccacctgtctggttggtattt
tacagaccagaatgtaaacttgaccaaaatcatattttgactgattgact
cgtttgatttgactgaaatttgatccTGAATActgatttgtcaaataaaa
gagactaGTAACAGAAGAAATTTGTTCCCATgagtatttggtactttgca
gaccggtctgtaaaatacacgttgacCACATGCTGGAACTCAGGAATTAC
TGcagcttttgacttgaaattttcaccagtgataGATATCTCAAACAGTg
agcaaaatttcaatttagtcaCGAGAtcggttggtattttacagaccggt
tcgttttttacctaaaatgctcactttcacTATAACAcgattttaccgaa
attttggCTGTAAGCTTGTATCATCAAGACCTAAcacttgtcaaaatttc
aagttaataGCATTTTCCCATTACTAGATGCAGTATCCTCGGGCTGTTTA
GGCTAAAAAGGCAATTTTGggccagtctgtaaaatacacgataaCAACAG
GTGGCAAAAAATCGACCCTCTGCCCCAAAATAAATGTCACGTTGAGTTAC
CTCACAAAATTTGAGTAAAATATCAAAGTgatttattttcgttttttttc
aaagaatgatgacgtcattaggtGGCAATGACGCCATCAATGATGCCGAA
ATTTTCACCGAAGATTCATATTTAGTGCACacttggaaaatgttaagtta
ttttgataaatatttcaaaagctaTAAAAAATCGTTTTGGGGGAGCCTCT
TTGCCCCCTTCCCCCtagatgctcgaagggttaagCTAACATTACATTGT
GTAATTTCTTTGATTGTTTCAGATCTGGCCTTTCGATACATGCAGATTCA
AGCAAGCCACTCGCACCACAAATCACACCATATATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044551-exon-sc0005763-1491911889:513..571 | TCONS_00044551-exon-sc0005763-1491911889:513..571 | Clytia hemisphaerica | exon |
| TCONS_00044551-exon-sc0005763-1510915933:513..571 | TCONS_00044551-exon-sc0005763-1510915933:513..571 | Clytia hemisphaerica | exon |
| TCONS_00044551-exon-sc0005763-1575043694:513..571 | TCONS_00044551-exon-sc0005763-1575043694:513..571 | Clytia hemisphaerica | exon |
| TCONS_00044551-exon-sc0005763-1491911889:1116..1229 | TCONS_00044551-exon-sc0005763-1491911889:1116..1229 | Clytia hemisphaerica | exon |
| TCONS_00044551-exon-sc0005763-1510915933:1116..1229 | TCONS_00044551-exon-sc0005763-1510915933:1116..1229 | Clytia hemisphaerica | exon |
| TCONS_00044551-exon-sc0005763-1575043694:1116..1229 | TCONS_00044551-exon-sc0005763-1575043694:1116..1229 | Clytia hemisphaerica | exon |
| TCONS_00044551-exon-sc0005763-1491911889:2235..2300 | TCONS_00044551-exon-sc0005763-1491911889:2235..2300 | Clytia hemisphaerica | exon |
| TCONS_00044551-exon-sc0005763-1510915933:2235..2300 | TCONS_00044551-exon-sc0005763-1510915933:2235..2300 | Clytia hemisphaerica | exon |
| TCONS_00044551-exon-sc0005763-1575043694:2235..2300 | TCONS_00044551-exon-sc0005763-1575043694:2235..2300 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005763 | supercontig | sc0005763:513..2300 + |
Blast
The following BLAST results are available for this feature:
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