TCONS_00044541 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044541
Unique NameTCONS_00044541
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length177

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044541 ID=TCONS_00044541|Name=TCONS_00044541|organism=Clytia hemisphaerica|type=transcript|length=177bp
GATAATTTTATGTATACAAGAAGCCTTTTTTGGTACAAAAATGGAATTAG
GTATTTAGTGTATATTTATTTCACTCTTGATTTATGTTTGAATTGTTcca
attttatttaatattcCAAATGACTTTGTACATATTTGTCGTTTTTTGTT
AATTattatgattttaaaaattaaaag
Run BLAST on NCBI

transcript from alignment at sc0005747:3514..3690

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044541 ID=TCONS_00044541|Name=TCONS_00044541|organism=Clytia hemisphaerica|type=transcript|length=177bp|location=Sequence derived from alignment at sc0005747:3514..3690 (Clytia hemisphaerica)
cttttaatttttaaaatcataatAATTAACAAAAAACGACAAATATGTAC
AAAGTCATTTGgaatattaaataaaattggAACAATTCAAACATAAATCA
AGAGTGAAATAAATATACACTAAATACCTAATTCCATTTTTGTACCAAAA
AAGGCTTCTTGTATACATAAAATTATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028163XLOC_028163Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044541-exon-sc0005747-1491911889:3514..3690TCONS_00044541-exon-sc0005747-1491911889:3514..3690Clytia hemisphaericaexon
TCONS_00044541-exon-sc0005747-1510915933:3514..3690TCONS_00044541-exon-sc0005747-1510915933:3514..3690Clytia hemisphaericaexon
TCONS_00044541-exon-sc0005747-1575043694:3514..3690TCONS_00044541-exon-sc0005747-1575043694:3514..3690Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0005747supercontigsc0005747:3514..3690 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044541 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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