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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044477 ID=TCONS_00044477|Name=TCONS_00044477|organism=Clytia hemisphaerica|type=transcript|length=283bp
GCTGAATGCAAGGTTGGTCAACAGTAAGCAGGCAAATCAACTGTTGGATG
TTCTTGAACAAACTCTGACTCTGAATCAAAAGATAAAGTTTCTTCCTGTT
CTGGAGTTCCATTTTTGCCAACCGGTGTTGAAGTGGACGTTTTTGAAATC
AAGCGTTTTATATCTCCAACAACTGCCTCGTCCAATGTCATGTAAACTGA
ATCCCGgaagGAATTTGCGTGTCAATGTAGTCAACATACCAGAAACTGAT
TTGTCATTGGCTTGTTTAAGGTATTCATATTTT Run BLAST on NCBI transcript from alignment at sc0005635:2125..3864- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044477 ID=TCONS_00044477|Name=TCONS_00044477|organism=Clytia hemisphaerica|type=transcript|length=1740bp|location=Sequence derived from alignment at sc0005635:2125..3864- (Clytia hemisphaerica)
GCTGAATGCAAGGTTGGTCAACAGTAAGGTAAGTCTTTTAAGACTCCCAT
AAATACAGTACAGAACATAAAGTCAAAACTGTTACACCATATATTTTGTA
TACTGCTACAATACAAACCAGACCCCCGCGCTCGATAGGATCGATCATCG
GAACGGCTCGATTATTTTTTACCGGGGGACACACAGCCCAAAGGTTGTGA
ATTTAAAAAAAAATTGCACATTTTAAAAATCAACTAAGAATTTTTTGGTA
CTTACACTTTCATCAGTAACCAAGTATGTCAGTGACTTGATTTCGTTTAA
GTGCTCTCTGCATTCTCCAAATTTAGATCTTGATATCTTCATTCTTCCTT
TAGCAGGCAAATCAACTGTTGGATGTTCTTGAACAAACTCTGACTCTGAA
TCAAAAGATAAAGTTTCTTCCTGTTCTGGAGTTCCATTTTTGCCAACCGG
TGTTGAAGTGGACGTTTTTGAAATCAAGCGTTTTATATCTCCAACAACTG
CCTCGTCCAATGTCATGTAAACTGAATCCCGGTAGGGGGAGCCGTCCATA
TTCATTTGACAACGCAAAACGTCAAATTGACGTTATGAGGGGGTGGGGGG
GTTTTCAAAAGTTAAGTTTGACGTTATAAGAAATCAAAGGTATACCTTTT
TGTGAAAATCGCGAATATTTGTAACCACCAACCACACTATACTTTATAAG
CTGTCGAAAATGTATTTGTGTATGAATTACATGAAAATATGGTGCTCGCA
TAATCCCATTGGTTCATGCTATGATATCATTACGTCATATTTTCATTGTT
TGCGCGATCGAGCAAACCACATTGCGCAAATGGGTAAAGAAGGTGGTACG
TCTAAAGCATGGCACAGACCTAGCGCCAAGTGGAGCTTTTAATTTCTTTT
TAAATAAAGGTCATTAGTTAAAAGAACACATACACGCACGGGTACAACCA
CGTGCAGACTTTGCGACGGAACGGGAAAACTGTGATGAAAAATGGCTACA
ACTTTTGGTATACATCGCTTGACGTTATCTGTGGGGTGTGGGGGGGTTCA
GAGGATAACGTCAATTTGACGTTATGCGTTGTCAAATGAATATGGACGGG
TCCCCTAGGTCTTTGGAAAAGTATCCCATGTTTCCTTTGTGTGTAAAATA
ATTGCGAACATGTGCTTACATGGCAATTTTGTTTTTCTCCAAGAAAAGCA
ATCACAATGTGGTTTGCGAAGGTCAACTGAATAGGATACATCATTTTCAA
AACTTTGAATTCTGTAGATGTTTTGTTGCTCCTCAATCCTCGTCTTATTG
ATATCCAACACATTTGCTATGAGCAGTTTGTTTCGACAGTGTTGGACAAG
ATAGCGTGGTCTGTTATGTAGATATTGGGGAATGTATTTACTATATCCTC
GGTGAAGGGAAGAACATACCAAATTTTTGTCCTTGTACCTTAAACAAAAG
TTGAAATTAATCAATCATGCAAACATAATTCAACTCAAAGTAGGTTTTAA
ATTCTTTGGTATTCCTACAAAGATCTTTCCATTTAGGCAGCTGAAGATTT
AAAAACTAAGAACTGAACAAGAAATTACTATTCATTTCTCTATGATAGCT
GCATTGACAATGCCTATTTAAATAGTTTATCAACAACTGTTACTTACTCT
TTATATTTTTCAGGAAGGAATTTGCGTGTCAATGTAGTCAACATACCAGA
AACTGATTTGTCATTGGCTTGTTTAAGGTATTCATATTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044477-exon-sc0005635-1575043694:3837..3864 | TCONS_00044477-exon-sc0005635-1575043694:3837..3864 | Clytia hemisphaerica | exon |
| TCONS_00044477-exon-sc0005635-1575043694:3334..3511 | TCONS_00044477-exon-sc0005635-1575043694:3334..3511 | Clytia hemisphaerica | exon |
| TCONS_00044477-exon-sc0005635-1575043694:2125..2201 | TCONS_00044477-exon-sc0005635-1575043694:2125..2201 | Clytia hemisphaerica | exon |
| TCONS_00044477-exon-sc0005635-1510915933:3837..3864 | TCONS_00044477-exon-sc0005635-1510915933:3837..3864 | Clytia hemisphaerica | exon |
| TCONS_00044477-exon-sc0005635-1510915933:3334..3511 | TCONS_00044477-exon-sc0005635-1510915933:3334..3511 | Clytia hemisphaerica | exon |
| TCONS_00044477-exon-sc0005635-1510915933:2125..2201 | TCONS_00044477-exon-sc0005635-1510915933:2125..2201 | Clytia hemisphaerica | exon |
| TCONS_00044477-exon-sc0005635-1491911889:3837..3864 | TCONS_00044477-exon-sc0005635-1491911889:3837..3864 | Clytia hemisphaerica | exon |
| TCONS_00044477-exon-sc0005635-1491911889:3334..3511 | TCONS_00044477-exon-sc0005635-1491911889:3334..3511 | Clytia hemisphaerica | exon |
| TCONS_00044477-exon-sc0005635-1491911889:2125..2201 | TCONS_00044477-exon-sc0005635-1491911889:2125..2201 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005635 | supercontig | sc0005635:2125..3864 - |
Blast
The following BLAST results are available for this feature:
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