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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044465 ID=TCONS_00044465|Name=TCONS_00044465|organism=Clytia hemisphaerica|type=transcript|length=2349bp caattatatatgtgttaaatgcataaccaggtaggtccataaaagtatca cttgttaaatttggactcaaattagatttttattcaatttcgcTCTGTTT GTTTCACAGGAACATCGTAAACGACGATATATGTATCGATTGTTCATCAT GTGGTCGATCATACGATTTGACGTGTGTCGGATTGGACGAAAAAAGTGAC GAGAGAGAACGAAATACATGGATGTGTAAAGATTGCATCCGTGAAACGCA AAAATATCCTTTACGTCGCGTCCGTCAATCGTCGGATTCCGGTTACCATG GTTACCACAAGCAACGAGGTGAAGCTTCAAGTCCGAAGAGCCCGAAATTG GAAGTGGTTTCCCCGATCGCTTCCCCGACAACCGAAAATAAAGAACATCC TTTGTCTAAAGGTCATTGCACCACCTGTGGAGAAGCTTGTATTGATAAAA TTAAAGACGAACTCATACTTCCCTGTAAAATATGCAAAAAGTATGCACAT GCAATCTGTGACCGAGTACCTCCTGAACTGGTTGAAGCTTTACAAGAAAA AGATTTGTTCATCTGTCGAAGCTGTCGCCAATCTAAATGTGAAAAGAGGG GCATACGGCAACGAATATCTCAAGTCTGTTTGTGGTCAAATGACATGCCA AAACCATGGAACTCTATACACGACATTTCATCAGACGCTCAAAATGAACC AACGCCACGCACTATATCCGCTTCTTCAATGCTATCAATCAAAGACGAAG AAACTATTCAAAAATCTACTTTACATCCTGAGCGCCCTATCAGTGAGGAC ACGCCCACGGTAGGGTGTATGTCTATATCTGAACCGCCCGTGTGGTGTCG GCTGAAAATCATATACTCGTTTGAATATAATGGTAAGTGAGATGGTTTGG TTCCATATTGTGGTAGAGAGCTTCCCTTGTCCAAACGCAATTTCCGTCAC CAACAGAAGTCATCAGTTACATTGGCTATCTCATTCTGTTCTGTAAATTA CACATGCAAAGTTACTGAAACGTCGTTCTGTCATTCAACATTGCTGTTAA GCCTATGGTTCGGTAAACCTTTGAATCATTGGTGTCTATGCTCATTTATA TTTTTGTGTCTTAGTGTTTAGGATTACTTTTTCTCATACACACTGTATAT TCGAATAATTAACCGATTCATTCATTCAAGTGTATTCTATCATCGTATAA TCTTAACATCCGTATATCAGTACATATATTCTCTTTTTTCTGTAATTTAG TCAAAATGTAGATAATATAATATCATTTCTTCCTTTTGTTCTCAATATCT GACAACCTTTTTTCATCATAAATATCAGTTCAGACATGCTGAGCTAATAG AGGCTTTTTGAATCTGATACGGCGAATGCCGAAAATCAAGCAATTTCACC GACAAAATGTTTTTGGTCTTTTGAAAAAAATGTCGTATTTAGTATAAGTA CATGGCAGTCAGACCAGTCAAAATGGTTTTGGTCTTTCTGTTTTGTTTAT TTGGTACAGCCAATCAATGTACAATGTACAACTAATACACGTTTTTTATA AAAACAAAGTATATAATAATATAAGGTTCGAGTCCAAAAAATTAAGAACA TTCGGACTCTTTCTTTGAAATAACACTGAAATGTTCTCAAAATGCCCaaa ataagaactttttgagaacattttttaaaaaaccccaaaatttataaaaa aaccttggaagcttaaaaagttctgacgttcttaggaaaaaaaaaaacgt gtactaccCTTTGTTCTGCTTTTTGTATGGTGTCTAATGGTTATTGCTTT GAGAACAGAAAGATGCAGTTGTATATTATTCATCCAGCAGTCACTATAAT AATCAagttgtatatttttgtttatatatattatattatatactcTTAAT CAGTAGCACATCATTTTTTGTGCACCTCCAAGAAAAGGATTATTTCACAT TAGGGCGTTACCAATCTTGTCTTGGTAGTTTAGTTTTCTTGCATTTCAAG TCAgtccttttctttttctctctttgcTTGGAATCTGGTATTTCTTAGCA CTTCTTCAGCACCTTTCATCTTTTTACTTGGTAAACCCTACCATCGATTC GTTGCAAAGATACTTAACTTGACGATTGATTTGATAACAGTGCTCTTCAT GTGGTCCTCATGCTCATTTGGATAGACTTGAAAATTCTAAACAGATGCTT ACGTGTAACTTTGGTGTTTGgtcaataatattttaacattaaatattttt ttaaagaagcagGTCTTCATTCATTATGCCTATGGAAGACATTTACATGA GAGTGTCATGAATCTGATACCTCCTCGCCTTAGTACCTTCGTATTTTGG Run BLAST on NCBI protein sequence of TCONS_00044465-protein >TCONS_00044465-protein ID=TCONS_00044465-protein|Name=TCONS_00044465-protein|organism=Clytia hemisphaerica|type=polypeptide|length=222bp
MCKDCIRETQKYPLRRVRQSSDSGYHGYHKQRGEASSPKSPKLEVVSPIA SPTTENKEHPLSKGHCTTCGEACIDKIKDELILPCKICKKYAHAICDRVP PELVEALQEKDLFICRSCRQSKCEKRGIRQRISQVCLWSNDMPKPWNSIH DISSDAQNEPTPRTISASSMLSIKDEETIQKSTLHPERPISEDTPTVGCM SISEPPVWCRLKIIYSFEYNGK Run BLAST on NCBI transcript from alignment at sc0005619:4..4019- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044465 ID=TCONS_00044465|Name=TCONS_00044465|organism=Clytia hemisphaerica|type=transcript|length=4016bp|location=Sequence derived from alignment at sc0005619:4..4019- (Clytia hemisphaerica) CAATTATATATGTGTTAAATGCATAACCAGGTAGGTCCATAAAAGTATCA
CTTGTTAAATTTGGACTCAAATTAGATTTTTATTCAATTTCGCTCTGTTT
GTTTCACAGGAACATCGTAAACGACGATATATGTATCGATTGTTCATCAT
GTGGTCGATCATACGATTTGACGTGTGTCGGATTGGACGAAAAAAGTGAC
GAGAGAGAACGAAATACATGGATGTGTAAAGTAAGTCAAACATCCGTCAA
GAGTCTAAGTGACTCCTCGTGTTGCTCTCAATGAGTAACCTTTTAACACC
CTTAATGCGGAAAATAAAGACAAAAAGCCACTGTACTGTATTTACAGATA
TAAATAGCCAAAAGTTCGCTCATTTAACAATCAAACACTTTTCTGAACAC
CGGAGTGGTTTGTTTGGCTCGGTTACATCATCATTTTTAGATTCAAAAAA
TCAGTTTGATTTGAATGTCGAGTGGGCTTTTGGATAGTCCACCGTTAGCA
CGATGTTCACCAACCAAAATTACTGACTGAAANGAGTGGGCTTTTGGATA
GTCCACCGTTAGCACGATGTTCACCAACCAAAATTACTGACTGAAAAATA
ATAGGTCCCAACCAACCTCCATAACTCGAAATTTCCATAATTCGAACAGA
TTTGTGTTTCCCGTGAGTGTTCGGATTATGGAGACTCCACTGTATAAATG
AATCAATTTTCTATATTTATATCTGTAAAACACATTTATTTCTTTTCATA
TTTCTAGGATTGCATCCGTGAAACGCAAAAATATCCTTTACGTCGCGTCC
GTCAATCGTCGGATTCCGGTTACCATGGTTACCACAAGCAACGAGGTGAA
GCTTCAAGTCCGAAGAGCCCGAAATTGGAAGTGGTTTCCCCGATCGCTTC
CCCGACAACCGAAAATAAAGAACATCCTTTGTCTAAAGGTCATTGCACCA
CCTGTGGAGAAGCTTGTATTGATAAAATTAAAGACGAACTCATACTTCCC
TGTAAAATATGCAAAAAGTAAGAACCTCTGGTATTTTTTATAATCGCTTT
ATTTTAAAGTGCATGGGATAAATTAATAGACATGATTGCTTGATATTGAA
CTGTACTAGTTCTGACACTTTGGTGAACCGTATATCGATGTTTCCTGGCT
GACTTTGCTTTCGGTCAGGCATTAGATATGCTGTGAGAGAATACTCTTTC
AAATTTTTCTGCAACTTGGCTGACATTGCCGTCATAATCAGTGCTCATAT
TTTCCACGTCTCAGACGGATTTCCTTCTCAAGGAAGTATGAAAAGAGACT
TTTCCACCTTCAGAATTTAGAAAAACTTAGCGAAATCTGTAAAATCTGCG
CTAATTTGTCGTGCTGATGATATTTTCCGTCTGAGATTAAAAAAAATCTG
CTTTAACCACTGCATAATAGAGGCTCGACAAAGCGGTGTTTGAATTTTTT
TCTCCAGACTCTCTACTTTTCCCGTTGAAACTAAATAGACCATTAGGGAT
CATGAAAAACTGGGCTGAACCTATCCACTGATAATGACAAAGTTTTCTTT
CCCTGATTTTCAGGTATGCACATGCAATCTGTGACCGAGTACCTCCTGAA
CTGGTTGAAGCTTTACAAGAAAAAGATTTGTTCATCTGTCGAAGCTGTCG
CCAATCTAAATGTGAAAAGAGGGGCATACGGCAACGAGTAAGATCCCCCC
TTTCTCATTCTATGGGCTTTCTGCTGAACTCCCCTATGATGAGTTTTATT
TTTTTGAATTAAACGTTTAATATAATAATAATATAACTAGCTTTAAACGT
TTAATATAATATTAATATAACTAGCTTCAAGAGACTAAAGGCTTGTGGAC
ACGAGAATCTTTTTTCACGTTTGAGCAATGTAACATGAATCCATCCCACC
AACCTGGAACGCTTTCTTGTGTCTCCACGCCATTTTTCTTTCTACCAATA
AAAGTGAAATATCACTTTTGTCCCTGGGACAATGGAGGAAAATTGATTCG
AATTAATTTTACTCCATTGTCCCAAGGACAAAATCAGCGTGTCTTTTGGT
TATTTCCCTCACTTTGTGTCTCATGAAACAGAAAAAGAAACCATGGGACA
CATTTTTTTTTCGCGTTGGTGCAATGCAGCATGATCCATTGCTGCATTGC
ACCAACGCGAAAAAAAACTTTTCGTGTCCACAAGCCTTGATGATCTTAAT
GATTATTCATCCCTACGAAATTATGTAAAACTAAGAGCTTTTTCTTTCTG
ATATTTACACTTTATCTCTTCATGTTTTCAGATATCTCAAGTCTGTTTGT
GGTCAAATGACATGCCAAAACCATGGAACTCTATACACGACATTTCATCA
GACGCTCAAAATGAACCAACGCCACGCACTATATCCGCTTCTTCAATGCT
ATCAATCAAAGACGAAGAAACTATTCAAAAATCTACTTTACATCCTGAGC
GCCCTATCAGTGAGGACACGCCCACGGTAGGGTGTATGTCTATATCTGAA
CCGCCCGTGTGGTGTCGGCTGAAAATCATATACTCGTTTGAATATAATGG
TAAGTGAGATGGTTTGGTTCCATATTGTGGTAGAGAGCTTCCCTTGTCCA
AACGCAATTTCCGTCACCAACAGAAGTCATCAGTTACATTGGCTATCTCA
TTCTGTTCTGTAAATTACACATGCAAAGTTACTGAAACGTCGTTCTGTCA
TTCAACATTGCTGTTAAGCCTATGGTTCGGTAAACCTTTGAATCATTGGT
GTCTATGCTCATTTATATTTTTGTGTCTTAGTGTTTAGGATTACTTTTTC
TCATACACACTGTATATTCGAATAATTAACCGATTCATTCATTCAAGTGT
ATTCTATCATCGTATAATCTTAACATCCGTATATCAGTACATATATTCTC
TTTTTTCTGTAATTTAGTCAAAATGTAGATAATATAATATCATTTCTTCC
TTTTGTTCTCAATATCTGACAACCTTTTTTCATCATAAATATCAGTTCAG
ACATGCTGAGCTAATAGAGGCTTTTTGAATCTGATACGGCGAATGCCGAA
AATCAAGCAATTTCACCGACAAAATGTTTTTGGTCTTTTGAAAAAAATGT
CGTATTTAGTATAAGTACATGGCAGTCAGACCAGTCAAAATGGTTTTGGT
CTTTCTGTTTTGTTTATTTGGTACAGCCAATCAATGTACAATGTACAACT
AATACACGTTTTTTATAAAAACAAAGTATATAATAATATAAGGTTCGAGT
CCAAAAAATTAAGAACATTCGGACTCTTTCTTTGAAATAACACTGAAATG
TTCTCAAAATGCCCAAAATAAGAACTTTTTGAGAACATTTTTTAAAAAAC
CCCAAAATTTATAAAAAAACCTTGGAAGCTTAAAAAGTTCTGACGTTCTT
AGGAAAAAAAAAAACGTGTACTACCCTTTGTTCTGCTTTTTGTATGGTGT
CTAATGGTTATTGCTTTGAGAACAGAAAGATGCAGTTGTATATTATTCAT
CCAGCAGTCACTATAATAATCAAGTTGTATATTTTTGTTTATATATATTA
TATTATATACTCTTAATCAGTAGCACATCATTTTTTGTGCACCTCCAAGA
AAAGGATTATTTCACATTAGGGCGTTACCAATCTTGTCTTGGTAGTTTAG
TTTTCTTGCATTTCAAGTCAGTCCTTTTCTTTTTCTCTCTTTGCTTGGAA
TCTGGTATTTCTTAGCACTTCTTCAGCACCTTTCATCTTTTTACTTGGTA
AACCCTACCATCGATTCGTTGCAAAGATACTTAACTTGACGATTGATTTG
ATAACAGTGCTCTTCATGTGGTCCTCATGCTCATTTGGATAGACTTGAAA
ATTCTAAACAGATGCTTACGTGTAACTTTGGTGTTTGGTCAATAATATTT
TAACATTAAATATTTTTTTAAAGAAGCAGGTCTTCATTCATTATGCCTAT
GGAAGACATTTACATGAGAGTGTCATGAATCTGATACCTCCTCGCCTTAG
TACCTTCGTATTTTGG Coding sequence (CDS) from alignment at sc0005619:4..4019- >TCONS_00044465 ID=TCONS_00044465|Name=TCONS_00044465|organism=Clytia hemisphaerica|type=CDS|length=2676bp|location=Sequence derived from alignment at sc0005619:4..4019- (Clytia hemisphaerica) ATATCTCAAGTCTGTTTGTGGTCAAATGACATGCCAAAACCATGGAACTC TATACACGACATTTCATCAGACGCTCAAAATGAACCAACGCCACGCACTA TATCCGCTTCTTCAATGCTATCAATCAAAGACGAAGAAACTATTCAAAAA TCTACTTTACATCCTGAGCGCCCTATCAGTGAGGACACGCCCACGGTAGG GTGTATGTCTATATCTGAACCGCCCGTGTGGTGTCGGCTGAAAATCATAT ACTCGTTTGAATATAATGGTAAGTGAGTATGCACATGCAATCTGTGACCG AGTACCTCCTGAACTGGTTGAAGCTTTACAAGAAAAAGATTTGTTCATCT GTCGAAGCTGTCGCCAATCTAAATGTGAAAAGAGGGGCATACGGCAACGA GATTGCATCCGTGAAACGCAAAAATATCCTTTACGTCGCGTCCGTCAATC GTCGGATTCCGGTTACCATGGTTACCACAAGCAACGAGGTGAAGCTTCAA GTCCGAAGAGCCCGAAATTGGAAGTGGTTTCCCCGATCGCTTCCCCGACA ACCGAAAATAAAGAACATCCTTTGTCTAAAGGTCATTGCACCACCTGTGG AGAAGCTTGTATTGATAAAATTAAAGACGAACTCATACTTCCCTGTAAAA TATGCAAAAAATGTGTAAAATATCTCAAGTCTGTTTGTGGTCAAATGACA TGCCAAAACCATGGAACTCTATACACGACATTTCATCAGACGCTCAAAAT GAACCAACGCCACGCACTATATCCGCTTCTTCAATGCTATCAATCAAAGA CGAAGAAACTATTCAAAAATCTACTTTACATCCTGAGCGCCCTATCAGTG AGGACACGCCCACGGTAGGGTGTATGTCTATATCTGAACCGCCCGTGTGG TGTCGGCTGAAAATCATATACTCGTTTGAATATAATGGTAAGTGAGTATG CACATGCAATCTGTGACCGAGTACCTCCTGAACTGGTTGAAGCTTTACAA GAAAAAGATTTGTTCATCTGTCGAAGCTGTCGCCAATCTAAATGTGAAAA GAGGGGCATACGGCAACGAGATTGCATCCGTGAAACGCAAAAATATCCTT TACGTCGCGTCCGTCAATCGTCGGATTCCGGTTACCATGGTTACCACAAG CAACGAGGTGAAGCTTCAAGTCCGAAGAGCCCGAAATTGGAAGTGGTTTC CCCGATCGCTTCCCCGACAACCGAAAATAAAGAACATCCTTTGTCTAAAG GTCATTGCACCACCTGTGGAGAAGCTTGTATTGATAAAATTAAAGACGAA CTCATACTTCCCTGTAAAATATGCAAAAAATGTGTAAAATATCTCAAGTC TGTTTGTGGTCAAATGACATGCCAAAACCATGGAACTCTATACACGACAT TTCATCAGACGCTCAAAATGAACCAACGCCACGCACTATATCCGCTTCTT CAATGCTATCAATCAAAGACGAAGAAACTATTCAAAAATCTACTTTACAT CCTGAGCGCCCTATCAGTGAGGACACGCCCACGGTAGGGTGTATGTCTAT ATCTGAACCGCCCGTGTGGTGTCGGCTGAAAATCATATACTCGTTTGAAT ATAATGGTAAGTGAGTATGCACATGCAATCTGTGACCGAGTACCTCCTGA ACTGGTTGAAGCTTTACAAGAAAAAGATTTGTTCATCTGTCGAAGCTGTC GCCAATCTAAATGTGAAAAGAGGGGCATACGGCAACGAGATTGCATCCGT GAAACGCAAAAATATCCTTTACGTCGCGTCCGTCAATCGTCGGATTCCGG TTACCATGGTTACCACAAGCAACGAGGTGAAGCTTCAAGTCCGAAGAGCC CGAAATTGGAAGTGGTTTCCCCGATCGCTTCCCCGACAACCGAAAATAAA GAACATCCTTTGTCTAAAGGTCATTGCACCACCTGTGGAGAAGCTTGTAT TGATAAAATTAAAGACGAACTCATACTTCCCTGTAAAATATGCAAAAAAT GTGTAAAATATCTCAAGTCTGTTTGTGGTCAAATGACATGCCAAAACCAT GGAACTCTATACACGACATTTCATCAGACGCTCAAAATGAACCAACGCCA CGCACTATATCCGCTTCTTCAATGCTATCAATCAAAGACGAAGAAACTAT TCAAAAATCTACTTTACATCCTGAGCGCCCTATCAGTGAGGACACGCCCA CGGTAGGGTGTATGTCTATATCTGAACCGCCCGTGTGGTGTCGGCTGAAA ATCATATACTCGTTTGAATATAATGGTAAGTGAGTATGCACATGCAATCT GTGACCGAGTACCTCCTGAACTGGTTGAAGCTTTACAAGAAAAAGATTTG TTCATCTGTCGAAGCTGTCGCCAATCTAAATGTGAAAAGAGGGGCATACG GCAACGAGATTGCATCCGTGAAACGCAAAAATATCCTTTACGTCGCGTCC GTCAATCGTCGGATTCCGGTTACCATGGTTACCACAAGCAACGAGGTGAA GCTTCAAGTCCGAAGAGCCCGAAATTGGAAGTGGTTTCCCCGATCGCTTC CCCGACAACCGAAAATAAAGAACATCCTTTGTCTAAAGGTCATTGCACCA CCTGTGGAGAAGCTTGTATTGATAAAATTAAAGACGAACTCATACTTCCC TGTAAAATATGCAAAAAATGTGTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
| TCONS_00044465-exon-sc0005619-1575043694:3790..4019 | TCONS_00044465-exon-sc0005619-1575043694:3790..4019 | Clytia hemisphaerica | exon |
| TCONS_00044465-exon-sc0005619-1575043694:3003..3262 | TCONS_00044465-exon-sc0005619-1575043694:3003..3262 | Clytia hemisphaerica | exon |
| TCONS_00044465-exon-sc0005619-1575043694:2333..2456 | TCONS_00044465-exon-sc0005619-1575043694:2333..2456 | Clytia hemisphaerica | exon |
| TCONS_00044465-exon-sc0005619-1575043694:4..1738 | TCONS_00044465-exon-sc0005619-1575043694:4..1738 | Clytia hemisphaerica | exon |
| TCONS_00044465-exon-sc0005619-1510915933:3790..4019 | TCONS_00044465-exon-sc0005619-1510915933:3790..4019 | Clytia hemisphaerica | exon |
| TCONS_00044465-exon-sc0005619-1510915933:3003..3262 | TCONS_00044465-exon-sc0005619-1510915933:3003..3262 | Clytia hemisphaerica | exon |
| TCONS_00044465-exon-sc0005619-1510915933:2333..2456 | TCONS_00044465-exon-sc0005619-1510915933:2333..2456 | Clytia hemisphaerica | exon |
| TCONS_00044465-exon-sc0005619-1510915933:4..1738 | TCONS_00044465-exon-sc0005619-1510915933:4..1738 | Clytia hemisphaerica | exon |
| TCONS_00044465-exon-sc0005619-1491911889:3790..4019 | TCONS_00044465-exon-sc0005619-1491911889:3790..4019 | Clytia hemisphaerica | exon |
| TCONS_00044465-exon-sc0005619-1491911889:3003..3262 | TCONS_00044465-exon-sc0005619-1491911889:3003..3262 | Clytia hemisphaerica | exon |
| TCONS_00044465-exon-sc0005619-1491911889:2333..2456 | TCONS_00044465-exon-sc0005619-1491911889:2333..2456 | Clytia hemisphaerica | exon |
| TCONS_00044465-exon-sc0005619-1491911889:4..1738 | TCONS_00044465-exon-sc0005619-1491911889:4..1738 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0005619 | supercontig | sc0005619:4..4019 - |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
|