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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044454 ID=TCONS_00044454|Name=TCONS_00044454|organism=Clytia hemisphaerica|type=transcript|length=406bp
TTTACAGATAATaactaataaatataatataatggATCCAGAAGGAACAG
GAGTGGCTATCGTTCTTGGAGATGACATCACTGACGCAGGGCTGGACGTG
ATGTcctgcaaaaaatattgctgtttggtttttgttttgtttttcgtaCT
GTCGCTGTCCTTGTTGGTTTGGTTTTTGTCATAAATGTTTAGATTGCTTT
ATGGTTTCTTTGTTCTGGTTTCGCTCTGTTCGTATTGctgatgtttttta
tatttttatagattttaaaTCACCTATAAGGtattttttgtacatttttg
tattatttgtttatatttaacaGGAAGATATCCTCTAAACTCACTGAAAT
TAGACATTTAAATTCAGTTTGGAAAGGTCAGAAAATAAGCTGTCAGTGAA
AAGACT Run BLAST on NCBI transcript from alignment at sc0005600:482..4201- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044454 ID=TCONS_00044454|Name=TCONS_00044454|organism=Clytia hemisphaerica|type=transcript|length=3720bp|location=Sequence derived from alignment at sc0005600:482..4201- (Clytia hemisphaerica)
TTTACAGATAATAACTAATAAATATAATATAATGGATCCAGAAGGAACAG
GAGTGGCTATCGTTCTTGGAGATGACATAACTGAAGATTTTTGGCGGGAA
ACTGCTTTCTCTGAGTCGCTTTGAGTGTTCCGTTGGTTAGTATTATTACA
ACTTTGTAATTTTTAATCGAATTTTTCAATAATCAAAATGAGTGATCAAG
TGCTATGTTATAAGTTTCCTGGAGAAAATAGTTACAAATCAGATTGGGCA
TCATATCATAAAGGAGCTGTTGTCGGGAATAAGATCCAAGTGGTTTGGAA
GAGGAAGGAGGTTGAGGTGGAAGTGGTGGAATTTGGCACCGAACAAGAAA
TTACAGGTATTTTATAATACCAACCGTGCTTGACTCGATATTTAAGAATT
TATTATTAGTTTAATCAGTTTATTTAAAGAATATTTCACGGTGTTTCCGT
ATGTTTAATTCTACAAGTTCTCTGCAAGCTAATGCAACATGTTATTCTCT
TTATATAGCTGTTTCAACATTTTAAATTTGGTATTTCGGTATCATTTTTG
TCAAAAAGCTATGGAGGGAGAGGTACAGATGCTTTTATTGTTAATGACGG
CTAGATCTTTCAACTGCAACCAGAGTACCAAGGAATAGCAGACCATGGTT
TTAAAATTGAGGATATGTAAAATTACTATCTGCATATTGGCAGGTCATCC
TTAAAAAACCAAATTTACACACATTGAGGAATTAAAATTGCCTTGCATTT
TCTTATCCATTTTTCAAGCAATTAGCTGAGTATTTCTTGAATTTCTTTTC
ACAGATTTTCTCACAGTAATGGTTTCTTAGGATTTTATTTCGGCAGAAGA
TTATCTTATCCATGGCTTGGAAAAAATTCAGGCATTTGCCAAGCATTCCC
CAGCAACACTTTCTGGTACAAATTACAACCCAGCAAAAAATTCAAACAGA
GTGGAGAGAGTTTTGTCAACACGTCCTCTTTAACCTTCTTAAAATCGAAA
CTAGACAAGTTTGAAGGAGTAATCTTCACTATGAAAGAAAAGACTTTCCA
AACATTTCCTGCTTGGAGAACTCAAGTTCTGCCTATCAGAATCTATTTCA
TCCGTCTAATTCATCAGGGCATATTCTATACTAATCATTATGAGTGACAA
GCATCCAAAAACATTGTATGACTTTCCTTAATTACAGACTTAAATTGCAA
CAAAGGTTATGAAGCCACACTCCTCAAAATGTGTTCTCTGAATGAAATAT
GAATGATTGATATTCGATCTAACCTGTTTGGCATCTTAAGACGTTCAGTG
CAGTGATAGAGATATTCTAGAAATCTGATTGGCTGTTGATGATGTAATGT
CATTTACAACAATCGCGACTACCATTATTCAATACTTAGCTGGCGATTGA
AAAGTCATTTAGATTTGGAAAAGGTCACTTCAGTTTGTTTTATGTTATTT
ATATTTCAAGAAGTACCAATTTCATTTGCGAAAGAGTAGACAAGAGCTAA
AAACTGTACAGTTTGTGAGCCAAATCTTTTCGACATTATAAACATCCTAT
TGATTTAAAGGTCACCATGGGTGACTGAGATATGATTAAAATTAGTTCTT
TGTTTTTATCATTCTCTTCTCAGGCAAAAGACGACTTGGAACTGCTTCAG
ACGCACAAAGCCACCAAAATTTTCCTTTTCCGACGACGAAATCAACATCC
TGTCATACAGGAAACTACTGGCTAAATTGGAGGCTTATGAAATTGAGCGT
GCTGTTATCACATTTTTCTTCCATTATTATTNAAATTGGAGGCTTATGAA
ATTGAGCGTGCTGTTATCACATTTTTCTTCCATTATTATTTGATGGATTT
GAATTATCCCCTGTGTTGGTCAGCGGTGCTCACATTTTGGCAATTTGCAG
TCCTGGGAGAGGAAGATATGGAAAATGTTCACGAAGAACTGAAAGAAATT
TGGAAGAAAAATTGGGGAGATTTTTGTGCATTTTTGGACGGCATGGAAGA
TGAATAATGTGAAATTGTCCTGGACTATTGAAACGGTTTCTTTTGTTTGG
ATATTTTCTTCGTATCTCGTGTCAGTTAATTGAAATTTTCTGTTTTGCGT
TTCTGCTAGACGGTTAAATTCTGTTGTTTCTAAGTCGGATTAAAATGGTA
AAAAAATTTCCCAGAGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATGTTC
GTTTCTTTTTTTCTTTTACAGATAATAACTAACAAATATAATTTAATGGA
TCCAGAAGGAACAGGAATGGCTATCGTTCTTGGGGATGACATCACTGACG
CAGGGCTGGACGTGATGTCCTGCAAAAAATATTGCTGTTTGGTTTTTGTT
TTGTTTTTCGTACTGTCGCTGTCCTTGTTGGTTTGGTTTTTGTCATAAAT
GTTTAGATTGCTTTATGGTTTCTTTGTTCTGGTTTCGCTCTGTTCGTATT
GCTGATGTTTTTTATATTTTTATAGATTTTAAATCACCTATAAGGTATTT
TTTGTACATTTTTGTATTATTTGTTTATATTTAACAGGAAGATATCCTCT
AAACTCACTGAAATTAGACATTTAAATTCAGTTTGGAAAGGTCAGAAAAT
AAGCTGTCAGTGAAAAGACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044454-exon-sc0005600-1575043694:4126..4201 | TCONS_00044454-exon-sc0005600-1575043694:4126..4201 | Clytia hemisphaerica | exon |
| TCONS_00044454-exon-sc0005600-1575043694:482..811 | TCONS_00044454-exon-sc0005600-1575043694:482..811 | Clytia hemisphaerica | exon |
| TCONS_00044454-exon-sc0005600-1510915933:4126..4201 | TCONS_00044454-exon-sc0005600-1510915933:4126..4201 | Clytia hemisphaerica | exon |
| TCONS_00044454-exon-sc0005600-1510915933:482..811 | TCONS_00044454-exon-sc0005600-1510915933:482..811 | Clytia hemisphaerica | exon |
| TCONS_00044454-exon-sc0005600-1491911889:4126..4201 | TCONS_00044454-exon-sc0005600-1491911889:4126..4201 | Clytia hemisphaerica | exon |
| TCONS_00044454-exon-sc0005600-1491911889:482..811 | TCONS_00044454-exon-sc0005600-1491911889:482..811 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005600 | supercontig | sc0005600:482..4201 - |
Blast
The following BLAST results are available for this feature:
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