|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044452 ID=TCONS_00044452|Name=TCONS_00044452|organism=Clytia hemisphaerica|type=transcript|length=471bp
AGATAAACCTATTTGAGTGAGTTTAGAACGAAAGGCAAGgaACAAATCAC
CAGACATTTCGAAGATTGAGGTCAAGTCTGGATACGTACGTCGAAGAAGT
CACAGTGGAATCATGGAAATCGTGATaagaattgttatttttgtattatc
aatggtcAGTTGGTGGCTGAGCGTGACAGTTGATTTACTatagaaatgct
gaaaatcataaaattttatgtttccaaTGAGCAAATACAGCATATTGTGA
AAATCGGATGAAACGATTATGATACAATGACTTTAAGCGCATATTTTGCA
GTATCGATGTTGGCTATTGTATCGAATGTTGGCGATTGTATCGAATGTTG
GTGattgtaatgaaaattttcgaagccattcattcgactctttgttaata
AAGACTGAAAATGACGACGATTTAGGATATTTTGAGATTCAATGAATTTA
AGCTGCATTAGGATAAGCGAT Run BLAST on NCBI transcript from alignment at sc0005598:2879..4209+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044452 ID=TCONS_00044452|Name=TCONS_00044452|organism=Clytia hemisphaerica|type=transcript|length=1331bp|location=Sequence derived from alignment at sc0005598:2879..4209+ (Clytia hemisphaerica)
AGATAAACCTATTTGAGTGAGTTTAGAACGAAAGGCAAGGTAAAATTCTA
CGccatttccggtcgaaaatatccaatattttgaacttgaaagacaagat
tcgagattccaagCAATTCGTAGAAAAGTTATCTTTCATTCTAGCCGAAA
AtctgctttcgtttttaaatgaACAGGAAAATACAGGTTCAGGGTGGCCA
GCGATTTCGGGAATCCAATTTCCAGTATAATCAAGTAcattttcacacat
tttttccatttttcaagtatattttcaaaattttcaagtatcttggacta
agaaaaataagtatatTCAAGTACATACTCGACTAAAATCGACTCGACGA
AAAAGGATATTAACAAACAATATAAAGAAAAAGGGTGGTGAGTTATCCTG
CGCTGGACATCAATCCAGGATTTGACCTCCGCGGCATCATGAATGATAAA
ATCAAGTATATTCCAGTACTAGAGATTTTCATTTCCAGTATATACTTGAA
AAATAacacttttatcaaaatttcaagtataatcaagtatcaattttttt
ctccagtatattcaagtattttcaagtatttccaGTATCGCTGGCCACCC
TGAGGTTGGTACAGGGGCAAAAACGGGTAACTTGAGTTTGGATTTCatga
atttaaaaattatatttccaagTATTCGTAATTCCAAAATTTCGATAGTA
CATAGTCCATAGAACATAGCTAgcaatttacaaatttacaagtattgtgc
aaatttggctttttttcacatccggtggatttccggcttccaaaataata
aaaactaGTTCTCAGTGTTTCGTTTACCTAAATGTCACATTTCGAGTAAT
CAAACCATACAAAGTTTACAtaccaaaacgtttttttttttttcaacagg
aACAAATCACCAGACATTTCGAAGATTGAGGTCAAGTCTGGATACGTACG
TCGAAGAAGTCACAGTGGAATCATGGAAATCGTGATaagaattgttattt
ttgtattatcaatggtcAGTTGGTGGCTGAGCGTGACAGTTGATTTACTa
tagaaatgctgaaaatcataaaattttatgtttccaaTGAGCAAATACAG
CATATTGTGAAAATCGGATGAAACGATTATGATACAATGACTTTAAGCGC
ATATTTTGCAGTATCGATGTTGGCTATTGTATCGAATGTTGGCGATTGTA
TCGAATGTTGGTGattgtaatgaaaattttcgaagccattcattcgactc
tttgttaataAAGACTGAAAATGACGACGATTTAGGATATTTTGAGATTC
AATGAATTTAAGCTGCATTAGGATAAGCGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044452-exon-sc0005598-1491911889:2879..2917 | TCONS_00044452-exon-sc0005598-1491911889:2879..2917 | Clytia hemisphaerica | exon |
| TCONS_00044452-exon-sc0005598-1510915933:2879..2917 | TCONS_00044452-exon-sc0005598-1510915933:2879..2917 | Clytia hemisphaerica | exon |
| TCONS_00044452-exon-sc0005598-1575043694:2879..2917 | TCONS_00044452-exon-sc0005598-1575043694:2879..2917 | Clytia hemisphaerica | exon |
| TCONS_00044452-exon-sc0005598-1491911889:3778..4209 | TCONS_00044452-exon-sc0005598-1491911889:3778..4209 | Clytia hemisphaerica | exon |
| TCONS_00044452-exon-sc0005598-1510915933:3778..4209 | TCONS_00044452-exon-sc0005598-1510915933:3778..4209 | Clytia hemisphaerica | exon |
| TCONS_00044452-exon-sc0005598-1575043694:3778..4209 | TCONS_00044452-exon-sc0005598-1575043694:3778..4209 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005598 | supercontig | sc0005598:2879..4209 + |
Blast
The following BLAST results are available for this feature:
|
