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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044364 ID=TCONS_00044364|Name=TCONS_00044364|organism=Clytia hemisphaerica|type=transcript|length=1033bp
TAAATGTGATTCGTCTAACAAGGTCAttagaaaacaataaaaaggtGCTT
TTCTATATCTGGATGATAAAATGAACCCCTCCAATGTGCTCCACAGTGGG
AtacatatttgaaaaaaaagttcttccTGTTTTAGGATCCTTGTAGCTGT
ATCAGTTGTCACTCAATGGCAAGAAGTCACCACACGCACCAACATTTTTC
TCACTCCTCCACCACCCATATGGCTATTCATCAGGAGATGGCTGGCCATA
TAAACAATTGTATACAATCATGCTTCTCCCGCATTGCAAGTGAATATATG
CCAACGTTTTCAATACCTCCACCTTCATGTCCGCCCAGTAGTGTACCACC
GCCACACCCTCACTTGCCGCCCTTCCAGTGTTGTGACCATACACCGATGA
CTGGACCTTCACACTATCACCAGCATCGACACCACCGACAGCATTACCAT
CAACATGGGGCGGCTGCTCTAGACCGCCATCATTCGATGCATTACGCCCA
ATCGTTCTCACCGCCACCCTTAGTGCACGCATCTTGGGAATCTACCCATG
AAACTGTTCATGGTCACTCACTTCATCATTCATCTGCAACAAGTTCAGAT
CATGTGAGAGCTGATTATGACCGGCATCAACATCCTCCTACTCCTCATCA
TCCCACAAGGCGGGCGCACCACCACCAACAGCATCACCACCATCACACAG
CTCAATCGCACAGACATACACCTTACTCTCATCATAACCATGATGCTCCT
CACAATAGACATGTAGTAAGGgattttattctttttcttaCTCTCGTACA
GATGGATTGCCAATCAAACAATTCATCGTTGTCAAAGCAGAAAGGCAAAT
CTTGAAATTAGAATCTTAgtaaagtttgaatttttctataagGTATACCT
TTGACAACGAGATTCGGCCTTGGGTCATGTGGATGAATCTCTCGTCTTTA
AGATGAAAGGTCCTATCAAAGGTTCATCTTATAATAAGAAGATTCTTAAT
ATGCTAAGACTCATTTTTAAATTGATCTTTCTG Run BLAST on NCBI transcript from alignment at sc0005457:6..1695- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044364 ID=TCONS_00044364|Name=TCONS_00044364|organism=Clytia hemisphaerica|type=transcript|length=1690bp|location=Sequence derived from alignment at sc0005457:6..1695- (Clytia hemisphaerica)
TAAATGTGATTCGTCTAACAAGGTCATTAGAAAACAATAAAAAGGTGCTT
TTCTATATCTGGATGATAAAATGAACCCCTCCAATGTGCTCCACAGTGGG
ATACATATTTGAAAAAAAAGTTCTTCCTGTTTTAGGATCCTTGTAGCTGT
ATCAGTTGTCACTCAATGGCAAGAAGTCACCACACGCACCAACATTTTTC
TCACTCCTCCACCACCCATATGGCTATTCATCAGGAGATGGCTGGCCATA
TAAACAATTGTATACAATCATGCTTCTCCCGCATTGCAAGGTATTTCCTT
TGCTCTATTTAACAGGCTAGACTTCAAAAAAAATGTTGGTTTCAGGGTTA
ACAGTTTGTCAGATTTTTTCAATTTATTATTAAGAGTCAAGCTTTTAACT
TTTCTTTTCGGTTATCATATCACAGCTTATCTTGAAATTCAAAATATTGT
ATTATATTTTTAGTGAATATATGCCAACGTTTTCAATACCTCCACCTTCA
TGTCCGCCCAGTAGTGTACCACCGCCACACCCTCACTTGCCGCCCTTCCA
GTGTTGTGACCATACACCGATGACTGGACCTTCACACTATCACCAGCATC
GACACCACCGACAGCATTACCATCAACATGGGGCGGCTGCTCTAGACCGC
CATCATTCGATGCATTACGCCCAATCGTTCTCACCGCCACCCTTAGTGCA
CGCATCTTGGGAATCTACCCATGAAACTGTTCATGTAAGCTATTTTATTC
ATTCAGGTTATGCCCCTGTATGCCCCTAAGCTAGGAAGATTTACTTTGTC
CAAAAGTTGCCACATTAAATACTACGCTCGCTTGATATTTTTCCCGTAAA
AACATATTTAAAGATAATTTTTTATTATGATATAGATATAGAAAGGAAGC
GCGCCTCTATGCTGACAAAGTAGTTTTGATACAAAAGGATTTCTCAAAAG
GGGTGCTGAAAGGAAGAAAACTGTTCTTTCTTTTTGTTTAAAAATGCTGT
CTAAGCAAATGATATGAGATACGTTAATTGATGCTCTTTAACTGCTGTGT
CAACATCAATAAAACAAAATCAATAATCTCGAGCCTAAACGAGAAAGTCA
AACTTGATTGAAGCAAAAGTTTAAAAGCTGGATACTAAGAAACCTTTTAG
ATTTGAAATGATATAGCTTTTCACTCTCGATTGCACAAAGTAAAATAATC
ATATTTTCTTGTTTTCAGGGTCACTCACTTCATCATTCATCTGCAACAAG
TTCAGATCATGTGAGAGCTGATTATGACCGGCATCAACATCCTCCTACTC
CTCATCATCCCACAAGGCGGGCGCACCACCACCAACAGCATCACCACCAT
CACACAGCTCAATCGCACAGACATACACCTTACTCTCATCATAACCATGA
TGCTCCTCACAATAGACATGTAGTAAGGGATTTTATTCTTTTTCTTACTC
TCGTACAGATGGATTGCCAATCAAACAATTCATCGTTGTCAAAGCAGAAA
GGCAAATCTTGAAATTAGAATCTTAGTAAAGTTTGAATTTTTCTATAAGG
TATACCTTTGACAACGAGATTCGGCCTTGGGTCATGTGGATGAATCTCTC
GTCTTTAAGATGAAAGGTCCTATCAAAGGTTCATCTTATAATAAGAAGAT
TCTTAATATGCTAAGACTCATTTTTAAATTGATCTTTCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044364-exon-sc0005457-1575043694:1406..1695 | TCONS_00044364-exon-sc0005457-1575043694:1406..1695 | Clytia hemisphaerica | exon |
| TCONS_00044364-exon-sc0005457-1575043694:962..1232 | TCONS_00044364-exon-sc0005457-1575043694:962..1232 | Clytia hemisphaerica | exon |
| TCONS_00044364-exon-sc0005457-1575043694:6..477 | TCONS_00044364-exon-sc0005457-1575043694:6..477 | Clytia hemisphaerica | exon |
| TCONS_00044364-exon-sc0005457-1510915933:1406..1695 | TCONS_00044364-exon-sc0005457-1510915933:1406..1695 | Clytia hemisphaerica | exon |
| TCONS_00044364-exon-sc0005457-1510915933:962..1232 | TCONS_00044364-exon-sc0005457-1510915933:962..1232 | Clytia hemisphaerica | exon |
| TCONS_00044364-exon-sc0005457-1510915933:6..477 | TCONS_00044364-exon-sc0005457-1510915933:6..477 | Clytia hemisphaerica | exon |
| TCONS_00044364-exon-sc0005457-1491911889:1406..1695 | TCONS_00044364-exon-sc0005457-1491911889:1406..1695 | Clytia hemisphaerica | exon |
| TCONS_00044364-exon-sc0005457-1491911889:962..1232 | TCONS_00044364-exon-sc0005457-1491911889:962..1232 | Clytia hemisphaerica | exon |
| TCONS_00044364-exon-sc0005457-1491911889:6..477 | TCONS_00044364-exon-sc0005457-1491911889:6..477 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005457 | supercontig | sc0005457:6..1695 - |
Blast
The following BLAST results are available for this feature:
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