TCONS_00044360 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044360
Unique NameTCONS_00044360
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length172

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044360 ID=TCONS_00044360|Name=TCONS_00044360|organism=Clytia hemisphaerica|type=transcript|length=172bp
CAATGATGGCCTTGACTTCAGTGTCGGCACAAAAAGAAAATGGACACCAA
CATTAAACGCAAAATGTAAAAGGCCAAATGTCATGGTCATGGACCAAAAA
GAAACCATCAAAAGCAGGAGCAGATGGCCTGTCTTCTGTCTTTGATTGTT
CAGGTTGTATTAATTCATTTCA
Run BLAST on NCBI

transcript from alignment at sc0005450:4118..4289

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044360 ID=TCONS_00044360|Name=TCONS_00044360|organism=Clytia hemisphaerica|type=transcript|length=172bp|location=Sequence derived from alignment at sc0005450:4118..4289 (Clytia hemisphaerica)
TGAAATGAATTAATACAACCTGAACAATCAAAGACAGAAGACAGGCCATC
TGCTCCTGCTTTTGATGGTTTCTTTTTGGTCCATGACCATGACATTTGGC
CTTTTACATTTTGCGTTTAATGTTGGTGTCCATTTTCTTTTTGTGCCGAC
ACTGAAGTCAAGGCCATCATTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_027993XLOC_027993Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044360-exon-sc0005450-1491911889:4118..4289TCONS_00044360-exon-sc0005450-1491911889:4118..4289Clytia hemisphaericaexon
TCONS_00044360-exon-sc0005450-1510915933:4118..4289TCONS_00044360-exon-sc0005450-1510915933:4118..4289Clytia hemisphaericaexon
TCONS_00044360-exon-sc0005450-1575043694:4118..4289TCONS_00044360-exon-sc0005450-1575043694:4118..4289Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0005450supercontigsc0005450:4118..4289 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044360 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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