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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044320 ID=TCONS_00044320|Name=TCONS_00044320|organism=Clytia hemisphaerica|type=transcript|length=416bp
TCATCAAACCTGATTGGTCGAACAAAACAATGGAGTTAACATCACCTAAG
ATACACCTTCTAAATTTGGTTGTTTGTTTTTGCGAAAAACATGAATAAGA
GCCATATCGTTTAAATTTGACTTGATATTGTCCATTTATCATTCATCAAA
GAAGACACAGAAGACTTGGACATTCCATTTTGTCTTTATTCCCTGAGCAA
GATGAAGGTTATCATTTTCGCGTGTTTGTTTGCCATTGCATTCTGTAGCC
CTGTCATTGAAGatgaaactgaaactgaacTTGAAGACTACAGTAAGTAT
TCTTtttaaatacagttgactctctctaattcgatcttcaagggaccaag
acttcgaattagagaaagattcgagttacagaaagtattttatactaaAC
TCTAGCTGAAGGGACC Run BLAST on NCBI transcript from alignment at sc0005363:748..2110- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044320 ID=TCONS_00044320|Name=TCONS_00044320|organism=Clytia hemisphaerica|type=transcript|length=1363bp|location=Sequence derived from alignment at sc0005363:748..2110- (Clytia hemisphaerica)
TCATCAAACCTGATTGGTCGAACAAAACAATGGAGTTAACATCACCTAAG
ATACACCTTCTAAATTTGGTTGTTTGTTTTTGCGAAAAACATGAATAAGA
GCCATATCGTTTAAATTTGACTTGATATTGTCCATTTATCATTCATCAAA
GAAGACACAGAAGACTTGGACATTCCATTTTGTCTTTATTCCCTGAGCAA
GGTACGTGATTGGATATTTGACTTACACGTTTTTTTTATTTTAAGAAACA
CACTTTTAAGAAACATGAGGCTCAGAATGCCTAAAAACTAAGAAACATCT
AAAAAACATGCTGAGGCTGAGAATGAGAAAACAACATTTTTTAATTCGTT
TTTTTTTTTTAAGATCGTTCCAATCAAAACAAATGTTTTTTTCTTTGCAT
GAAAAATAGGCTGATTATGTCAAAAAGTTTAGAAACACATGTAAGAAACA
TTTAAGGCTCAAAATGCCGATTTCTTAAGAAACATTGAGGCTGCTTGGTA
ATACTAGTTTCTTAAAAATAACTTGACTAAGGGTTGTGAAGGTTTTCTAC
ACTGTTATTATTGCTAAGAAAATCAGACTTCTAATCATGACGTTCTAACC
CAGACGGCACACAACGTCAAAACAACGTCCATCTAACGTTCCTAACGTCC
AAATAACGTTATTTAAACGTTAAAACAACGTTGTGTGCCAGTTGGGAAAT
CTAAAACGTCATTTAAAGCTTCAGCCTTCAATCTCTTCCAAGCCTAAAAA
TTTTTTTGCTTTTTGTCTTTTCTCCGTAGACAATTCTCATAGTTTTTCAC
CATTCATTTCAAACCTGTATCGAAATATCAATATTTTATTTCAAATATTT
GAATTTTGAAGCCCAAATCTTGTCTACTATCTTACTTTCTTTGGAAGCTA
GAGTTTGATTCTAAGATAAAGATCCTAAAGTACCGGCGCCGACTTTAAGA
TACAAAGCCGACCTTACGGTACCGACTATAATATAGACTTGACCCTAACA
GCTGTTTCAAATTTTGTCGGTTTTTCTCTTTCAGATGAAGGTTATCATTT
TCGCGTGTTTGTTTGCNAAAGCCGACCTTACGGTACCGACTATAATATAG
ACTTGACCCTAACAGCTGTTTCAAATTTTGTCGGTTTTTCTCTTTCAGAT
GAAGGTTATCATTTTCGCGTGTTTGTTTGCCATTGCATTCTGTAGCCCTG
TCATTGAAGATGAAACTGAAACTGAACTTGAAGACTACAGTAAGTATTCT
TTTTAAATACAGTTGACTCTCTCTAATTCGATCTTCAAGGGACCAAGACT
TCGAATTAGAGAAAGATTCGAGTTACAGAAAGTATTTTATACTAAACTCT
AGCTGAAGGGACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044320-exon-sc0005363-1575043694:1910..2110 | TCONS_00044320-exon-sc0005363-1575043694:1910..2110 | Clytia hemisphaerica | exon |
| TCONS_00044320-exon-sc0005363-1575043694:748..962 | TCONS_00044320-exon-sc0005363-1575043694:748..962 | Clytia hemisphaerica | exon |
| TCONS_00044320-exon-sc0005363-1510915933:1910..2110 | TCONS_00044320-exon-sc0005363-1510915933:1910..2110 | Clytia hemisphaerica | exon |
| TCONS_00044320-exon-sc0005363-1510915933:748..962 | TCONS_00044320-exon-sc0005363-1510915933:748..962 | Clytia hemisphaerica | exon |
| TCONS_00044320-exon-sc0005363-1491911889:1910..2110 | TCONS_00044320-exon-sc0005363-1491911889:1910..2110 | Clytia hemisphaerica | exon |
| TCONS_00044320-exon-sc0005363-1491911889:748..962 | TCONS_00044320-exon-sc0005363-1491911889:748..962 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005363 | supercontig | sc0005363:748..2110 - |
Blast
The following BLAST results are available for this feature:
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