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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044301 ID=TCONS_00044301|Name=TCONS_00044301|organism=Clytia hemisphaerica|type=transcript|length=330bp
TTCACGAAATGAAAGACTTTATCCTGGATTTGAAGGGCGGCTCGTGTGGT
CGTGCAACAACATACAAATATATCAGTACTCAAATTTATGGCTTGACGGC
TGGGCTCCCTGTCTGGTGTATGACTGTTCAGCTGCTTCCTGAATACTCTA
TATACAAATGTAGAAGATGCAAATTTACACCTGTTGTCATGCTGCAATCG
TATCAAGAAGACACAAACATGAGAAACTCAGAGGCAGATGAAGCGAGAGA
GAAATTCTTCCTTCCCTATTCTTGTTAACTTAAATCTACTTTCTGAATAA
ATCAAGAAGAAATCATTTATTACATTAACA Run BLAST on NCBI transcript from alignment at sc0005326:489..1774- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044301 ID=TCONS_00044301|Name=TCONS_00044301|organism=Clytia hemisphaerica|type=transcript|length=1286bp|location=Sequence derived from alignment at sc0005326:489..1774- (Clytia hemisphaerica)
TTCACGAAATGAAAGACTTTATCCTGGATTTGAAGGTAGACATTATTTGA
AACATTCTTATTTGGATTAAAAGTACTATTAGTTCTTTTCATGGCTGATG
AAAATAGACCTACCCCGAAGGTCTTTTAAGTTAACTGATGTTCGTTCGTC
TGTTACCAGCTTTTCTCGGGATTGGCTCATTAGTTTTTTTCTGATCCTTT
GAACAGTGATGTAAATGGTGATTTTCCAAAAAAATATTTTTTGGGCAAGT
TTGGGCTTTGCGAATTCATGATATTCATGACGTAATCTTTTATACGGAAG
CACCCGAGATAACCCGAAACTAGTGGCAAAATAACAAAAGATTAGTGGCA
AATTTTGCCACTAGTTCCGGGTTATCTCGGGTGCTTCCGTATAAAAGATT
ACGTCATTAATATCATGAATTTGCTTCAGTAGTTTTTTCTGATTTTATGC
ATAAAGATGGAGGGCGAGGTTCTCTAAAAAGTGGCTGAATCAGTTTTTTT
TCGGAAAACCTTTTTCGGCCGTAAAAATCTGAATTTCTTATTTGGGGAAA
TCCACTTTTGCCACCTTTAGGGACAATGAGCATTTTTCTAGATTAGCTTG
GCATTTTTTTCTTATTTTTTGCATAGTGATATAAAATGGTAATATTTAAT
TTCAGATGGTGCCCGATTTTCGAAAAAAATTTGGACCAAAAAGTGCCTAA
CATGGATTTTTTTTTTGACTCACGCTAAGATATTTATTCACCCCAGTATC
TACGACTATAACTATACTTGACATGTAGAGCTGTGATACTTCAAGCCGCT
CAATACACTTTCTTACTCTCTTTCTATTTGTCCTGTTTTTATCTGATTCN
TGATACTTCAAGCCGCTCAATACACTTTCTTACTCTCTTGCTATTTGTCC
TGTTTTTATCTGATTTCATCAATCAGATAGGTCCATTCAGCATGTTGCTT
GTTTTTGTTATTTTTGAGTTTATTTTCTCTTCATTTTATAGGGCGGCTCG
TGTGGTCGTGCAACAACATACAAATATATCAGTACTCAAATTTATGGCTT
GACGGCTGGGCTCCCTGTCTGGTGTATGACTGTTCAGCTGCTTCCTGAAT
ACTCTATATACAAATGTAGAAGATGCAAATTTACACCTGTTGTCATGCTG
CAATCGTATCAAGAAGACACAAACATGAGAAACTCAGAGGCAGATGAAGC
GAGAGAGAAATTCTTCCTTCCCTATTCTTGTTAACTTAAATCTACTTTCT
GAATAAATCAAGAAGAAATCATTTATTACATTAACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044301-exon-sc0005326-1575043694:1740..1774 | TCONS_00044301-exon-sc0005326-1575043694:1740..1774 | Clytia hemisphaerica | exon |
| TCONS_00044301-exon-sc0005326-1575043694:489..783 | TCONS_00044301-exon-sc0005326-1575043694:489..783 | Clytia hemisphaerica | exon |
| TCONS_00044301-exon-sc0005326-1510915933:1740..1774 | TCONS_00044301-exon-sc0005326-1510915933:1740..1774 | Clytia hemisphaerica | exon |
| TCONS_00044301-exon-sc0005326-1510915933:489..783 | TCONS_00044301-exon-sc0005326-1510915933:489..783 | Clytia hemisphaerica | exon |
| TCONS_00044301-exon-sc0005326-1491911889:1740..1774 | TCONS_00044301-exon-sc0005326-1491911889:1740..1774 | Clytia hemisphaerica | exon |
| TCONS_00044301-exon-sc0005326-1491911889:489..783 | TCONS_00044301-exon-sc0005326-1491911889:489..783 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005326 | supercontig | sc0005326:489..1774 - |
Blast
The following BLAST results are available for this feature:
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