TCONS_00044256 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044256
Unique NameTCONS_00044256
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length186

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044256 ID=TCONS_00044256|Name=TCONS_00044256|organism=Clytia hemisphaerica|type=transcript|length=186bp
CTGATGTTTTGATAGATGTTATAGGTATCCgtactttttgagttttcatc
CATCGTTTGCTTCTACTGTTCTTTCTACAGTAGTTCAAATGCTTCTCGTT
CGCGTGTCCTGTCTAAAAACAGCTTtcaattttattctttttttatcctC
CCTCTCTTCAATCCTTTCTTATATTCCTTGActaaa
Run BLAST on NCBI

transcript from alignment at sc0005253:3759..3944

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044256 ID=TCONS_00044256|Name=TCONS_00044256|organism=Clytia hemisphaerica|type=transcript|length=186bp|location=Sequence derived from alignment at sc0005253:3759..3944 (Clytia hemisphaerica)
tttagTCAAGGAATATAAGAAAGGATTGAAGAGAGGGaggataaaaaaag
aataaaattgaAAGCTGTTTTTAGACAGGACACGCGAACGAGAAGCATTT
GAACTACTGTAGAAAGAACAGTAGAAGCAAACGATGgatgaaaactcaaa
aagtacGGATACCTATAACATCTATCAAAACATCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_027894XLOC_027894Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044256-exon-sc0005253-1491911889:3759..3944TCONS_00044256-exon-sc0005253-1491911889:3759..3944Clytia hemisphaericaexon
TCONS_00044256-exon-sc0005253-1510915933:3759..3944TCONS_00044256-exon-sc0005253-1510915933:3759..3944Clytia hemisphaericaexon
TCONS_00044256-exon-sc0005253-1575043694:3759..3944TCONS_00044256-exon-sc0005253-1575043694:3759..3944Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0005253supercontigsc0005253:3759..3944 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044256 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top