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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044223 ID=TCONS_00044223|Name=TCONS_00044223|organism=Clytia hemisphaerica|type=transcript|length=606bp
CTAAAAACTATTGAACGAAGATAAGAAAAAGGGGAGAAGACCTTCCATAC
TATAACAGATAATAGTTAAGGGGAGCAAAAAATAACTCACTGAAAGGACC
TGCATTTCAAGATCCTCCATAGCTAAATCTTTTGCAGGTTGTGGATCGAT
GTTTACTTGCCACGACTGACCATCAGCTGCCATGTTTTTTTGTGTGTGTC
ACGGAAGCgaaaagtttcactttcgttttcaacaaTGCAAATACACAGAT
TGGCTTTTGATCAAATTGTTTTGTTATTAAAGCTTTGTCTTTAATTAGGC
CCAAAGTACAATTAAAAGATATCCTAAGAAGAAAGAGGTACTCATAAAGT
GACAAAACattaaaaaggttaaaaaatgtaaaatttctctcattatcagg
aaatttaaaatcaactttgatatcGACAATAATTTATGCGAATTATCGTT
GCCGGTAATTGAAGACCAAAACATGAAACAAGATGGCGACCGGATCGGTC
GGAGTCAACCAACTGGAACTTGATGGCAACATAAAATTTGCAGTGATAAG
AGATCTTTACAACACCAAAGATGAAAGTGATAAGCAATTCACAAGGCGAA
TACTTG Run BLAST on NCBI transcript from alignment at sc0005196:1..948- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044223 ID=TCONS_00044223|Name=TCONS_00044223|organism=Clytia hemisphaerica|type=transcript|length=948bp|location=Sequence derived from alignment at sc0005196:1..948- (Clytia hemisphaerica)
CTAAAAACTATTGAACGAAGATAAGAAAAAGGGGAGAAGACCTTCCATAC
TATAACAGATAATAGTTAAGGGGAGCAAAAAATAACTCACTGAAAGGACC
TGCATTTCAAGATCCTCCATAGCTAAATCTTTTGCAGGTTGTGGATCGAT
GTTTACTTGCCACGACTGACCATCAGCTGCCATGTTTTTTTGTGTGTGTC
ACGGAAGCGAAAAGTTTCACTTTCGTTTTCAACAATGCAAATACACAGAT
TGGCTTTTGATCAAATTGTTTTGTTATTAAAGCTTTGTCTTTAATTAGGC
CCAAAGTACAATTAAAAGATATCCTAAGAAGAAAGAGGTACTCATAAAGT
GACAAAACATTAAAAAGGTTAAAAAATGTAAAATTTCTCTCATTATCAGG
AAATTTAAAATCAACTTTGATATCGACAATAATTTATGCGAATTATCGTT
GCCGGTAATTGAAGACCAAAACATGAAACAAGATGGCGACCGGATCGGTC
GGAGTCAACCAACTGTAAGTTTTTCACGAAAGAAATCAAACTCCATTTCG
CCAGTTTTATCTGAATTTATAGCTTGAATTCACCCCTTAGGTATTGAAGC
TCCTGCAAAATGTATAAAAATTAGTAGCTGTTGTAGACACGAGCGTTGTT
TTGAACATATAAAATTGTGTGTCCAAAAACTCTGGAATTTCTTGTCTCTT
CTTTTATTCAGTCTCATCTCATTTTAAAGTCGATGTGCGGCAATTAAGAA
TTTTCCTTTGATACAACGCGAGTGTATTTATAATTTAAAAAATATATACT
CTCTGAGCTATGAGTACTTTTCTCACTACCTAAAGAATCTACCTAATTTT
CTCTAGGGAACTTGATGGCAACATAAAATTTGCAGTGATAAGAGATCTTT
ACAACACCAAAGATGAAAGTGATAAGCAATTCACAAGGCGAATACTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044223-exon-sc0005196-1575043694:435..948 | TCONS_00044223-exon-sc0005196-1575043694:435..948 | Clytia hemisphaerica | exon |
| TCONS_00044223-exon-sc0005196-1575043694:1..92 | TCONS_00044223-exon-sc0005196-1575043694:1..92 | Clytia hemisphaerica | exon |
| TCONS_00044223-exon-sc0005196-1510915933:435..948 | TCONS_00044223-exon-sc0005196-1510915933:435..948 | Clytia hemisphaerica | exon |
| TCONS_00044223-exon-sc0005196-1510915933:1..92 | TCONS_00044223-exon-sc0005196-1510915933:1..92 | Clytia hemisphaerica | exon |
| TCONS_00044223-exon-sc0005196-1491911889:435..948 | TCONS_00044223-exon-sc0005196-1491911889:435..948 | Clytia hemisphaerica | exon |
| TCONS_00044223-exon-sc0005196-1491911889:1..92 | TCONS_00044223-exon-sc0005196-1491911889:1..92 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005196 | supercontig | sc0005196:1..948 - |
Blast
The following BLAST results are available for this feature:
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