|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044156 ID=TCONS_00044156|Name=TCONS_00044156|organism=Clytia hemisphaerica|type=transcript|length=1027bp
aaaaaattcaacctttcaaTGCAGACAAAGTATTACATACTATATAAAGA
AATTTAAACTTTAGTCTCACAAATCAAGGACATATTCATAATAATGTGGT
TAATGttaatatataaaaaaagaaaagataaaacttaaaaatactTTTCC
TACTTAGAAAAAGATTGGGTATAACCATGGTATGACTTAACTCGAAAAGA
TCTTTTGGCTTTTAGGCAATGTGAATATTGAGGCTGGGAAAATTTCTTAT
GATAAAAAACAACCACTGGAcaagtttaaaggttttgtttttaaataaga
gtgatgtcgtttgcttactcatcaattttaattcataagCAAGATTGCTC
aggaagaggaaaagaaaaacatttttttgcttatatcagcataatataac
aatgggacactgtcctgatatgaaatatgtgtctgatatgaaacgggaac
acttatgtaaaaacaaaacctttaaagcatTCGAAAAGAAGCAAAAATCT
GCAAATGTACAATTGACATAGTGCCTAAAAATTCTTTATTCAAGAAGTTA
GCTATATGAATCAAAAAAANCAATTGACATAGTGCCTAAAAATTCTTTAT
TCAAGAAGTTAGCTATAAATCAAAAAAGTATCAAGGAGATCATTTATTGG
TTTCTCAcatataaacaaaataaaaataaacaacagaGGACAGAAAaccg
aaaaactgaaaaaaaacctaaaataattttttttgatgaaattatagaaa
aacaacGGATGATTATATCAATGTACACGTAATAATAATGATGCTAATAA
TTAAttaataataaatttttaagtGTTGTTTTCGCTAATATCTAGACAGA
AACCATATGCCCTTTTTCACTAGTGGTTGACTTTCTACTAGGAGGAAATA
CTAGAAGATACAAAATACACTTAGTTAAGTTCATTTGTTTctacacgctt
ctttttttataagaatacactttataagaatgtccatgatgaaaatggcc
aaaaaattaagaataatgctaagaata Run BLAST on NCBI transcript from alignment at sc0005081:1016..2042 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044156 ID=TCONS_00044156|Name=TCONS_00044156|organism=Clytia hemisphaerica|type=transcript|length=1027bp|location=Sequence derived from alignment at sc0005081:1016..2042 (Clytia hemisphaerica)
tattcttagcattattcttaattttttggccattttcatcatggacattc
ttataaagtgtattcttataaaaaaagaagcgtgtagAAACAAATGAACT
TAACTAAGTGTATTTTGTATCTTCTAGTATTTCCTCCTAGTAGAAAGTCA
ACCACTAGTGAAAAAGGGCATATGGTTTCTGTCTAGATATTAGCGAAAAC
AACacttaaaaatttattattaaTTAATTATTAGCATCATTATTATTACG
TGTACATTGATATAATCATCCgttgtttttctataatttcatcaaaaaaa
attattttaggttttttttcagtttttcggtTTTCTGTCCtctgttgttt
atttttattttgtttatatgTGAGAAACCAATAAATGATCTCCTTGATAC
TTTTTTGATTTATAGCTAACTTCTTGAATAAAGAATTTTTAGGCACTATG
TCAATTGNTTTTTTTGATTCATATAGCTAACTTCTTGAATAAAGAATTTT
TAGGCACTATGTCAATTGTACATTTGCAGATTTTTGCTTCTTTTCGAatg
ctttaaaggttttgtttttacataagtgttcccgtttcatatcagacaca
tatttcatatcaggacagtgtcccattgttatattatgctgatataagca
aaaaaatgtttttcttttcctcttcctGAGCAATCTTGcttatgaattaa
aattgatgagtaagcaaacgacatcactcttatttaaaaacaaaaccttt
aaacttgTCCAGTGGTTGTTTTTTATCATAAGAAATTTTCCCAGCCTCAA
TATTCACATTGCCTAAAAGCCAAAAGATCTTTTCGAGTTAAGTCATACCA
TGGTTATACCCAATCTTTTTCTAAGTAGGAAAagtatttttaagttttat
cttttctttttttatatattaaCATTAACCACATTATTATGAATATGTCC
TTGATTTGTGAGACTAAAGTTTAAATTTCTTTATATAGTATGTAATACTT
TGTCTGCAttgaaaggttgaatttttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044156-exon-sc0005081-1491911889:1016..2042 | TCONS_00044156-exon-sc0005081-1491911889:1016..2042 | Clytia hemisphaerica | exon |
| TCONS_00044156-exon-sc0005081-1510915933:1016..2042 | TCONS_00044156-exon-sc0005081-1510915933:1016..2042 | Clytia hemisphaerica | exon |
| TCONS_00044156-exon-sc0005081-1575043694:1016..2042 | TCONS_00044156-exon-sc0005081-1575043694:1016..2042 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005081 | supercontig | sc0005081:1016..2042 . |
Blast
The following BLAST results are available for this feature:
|
