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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044033 ID=TCONS_00044033|Name=TCONS_00044033|organism=Clytia hemisphaerica|type=transcript|length=961bp
TGACTTTTGATGTAATTAATGTCAATTGTTTACTATAACTTTGCTCATAA
ACACCATCTTGATCTTGAAGATGAAAACGAAGTTCTCTATATTTCTCTCT
GAACTGGTTACGAAGTGTCTCAATTTTGGTAGCACGCGATTTGATGAGTT
CTGGCGACTCTTTGATGTCATCTGGTGCATAGTCTTGGATGATGTCAAGT
ATCTGATCCTCAAGACCTGAGGCTGAGaacaaaatgattttgatttctgt
CTCTGCCATTGagcgaattgaagtgtcggacgacggacgaattgaggtgt
cggacgacggacgaattgaagtgtcggacgacgaatgaattgaagtgtcg
gacgacggacgagttgaagtgtcggacgacggatgagTTGAGGTGTCGGA
CAACGgtcgaattgaagtgtcggacgacggatgaattgaagtgtcggacg
acggacgagttGAAGTTTCGGACGACGGATGAGCGATAACCTTTTCTCCG
GTTGATGCAAGGATGCGATAGTCAATACGATCTTTCTTCCTCGTGTTCAT
TGATCGCGCCCACAAACAGCAGTGATGTTGATTGAACGGTCCTGTTTGAA
TGTAGCGTCAGGATGAGATTGAATAAACAATAACGCCGTGTTTGTAACAC
TGTTCAGTGCATTAATTTATTGATGTGTAGTAATGTAGTNAGTGATGTTG
ATTGAACGGTTCTGTTTGAATGTAGCGTCAGGATGAGATTGAATAAACAA
TAACGCCGTGTTTGTAACACTGTTCAGTGCATTAATTTATTGATGTGTAG
TAATGTAGTGAACAGTGTTACAAACACGGCGTTATTGtttaattaaaata
acttatttTTCATTCTGTTGGGGGAGTGTTAAGGCATAAACCTTAGTTTT
AATCCAGTTTTGGTCAATCAAACACTCTCACCTTTTTCAGTGtgcagcca
ttttgtttgtt Run BLAST on NCBI transcript from alignment at sc0004867:2..1284+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044033 ID=TCONS_00044033|Name=TCONS_00044033|organism=Clytia hemisphaerica|type=transcript|length=1283bp|location=Sequence derived from alignment at sc0004867:2..1284+ (Clytia hemisphaerica)
TGACTTTTGATGTAATTAATGTCAATTGTTTACTATAACTTTGCTCATAA
ACACCATCTTGATCTTGAAGATGAAAACGAAGTTCTCTATATTTCTCTCT
GAACTGGTTACGAAGTGTCTCAATTTTGGTAGCACGCGATTTGATGAGTT
CTGGCGACTCTTTGATGTCATCTGGTGCATAGTCTTGGATGATGTCAAGT
ATCTGATCCTCAAGACCTGAGGCTGAGaacaaaatgattttgatttctgt
CTCTGCCATTGagcgaattgaagtgtcggacNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtgtcgg
acgacggatgaattgaagtgtcggacgacggacgaattgaggtgtcggac
gacggacgaattgaagtgtcggacgacggatgaattgaaGTGTAGGACGA
CGGACGagttgaggtgtcggacgacggacgaattgaggtgtcggacgacg
gatgaattgaagtgtcggacgacggacgaattgaaNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNattgaagtgtcggacgacggacgaattgaggtgtcg
gacgacggacgaattgaggtgtcggacgacggacgaattgaagtgtcgga
cgacgaatgaattgaagtgtcggacgacggacgagttgaagtgtcggacg
acggatgagTTGAGGTGTCGGACAACGgtcgaattgaagtgtcggacgac
ggatgaattgaagtgtcggacgacggacgagttGAAGTTTCGGACGACGG
ATGAGCGATAACCTTTTCTCCGGTTGATGCAAGGATGCGATAGTCAATAC
GATCTTTCTTCCTCGTGTTCATTGATCGCGCCCACAAACAGCAGTGATGT
TGATTGAACGGTCCTGTTTGAATGTAGCGTCAGGATGAGATTGAATAAAC
AATAACGCCGTGTTTGTAACACTGTTCAGTGCATTAATTTATTGATGTGT
AGTAATGTAGTNAGTGATGTTGATTGAACGGTTCTGTTTGAATGTAGCGT
CAGGATGAGATTGAATAAACAATAACGCCGTGTTTGTAACACTGTTCAGT
GCATTAATTTATTGATGTGTAGTAATGTAGTGAACAGTGTTACAAACACG
GCGTTATTGtttaattaaaataacttatttTTCATTCTGTTGGGGGAGTG
TTAAGGCATAAACCTTAGTTTTAATCCAGTTTTGGTCAATCAAACACTCT
CACCTTTTTCAGTGtgcagccattttgtttgtt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044033-exon-sc0004867-1491911889:2..273 | TCONS_00044033-exon-sc0004867-1491911889:2..273 | Clytia hemisphaerica | exon |
| TCONS_00044033-exon-sc0004867-1510915933:2..273 | TCONS_00044033-exon-sc0004867-1510915933:2..273 | Clytia hemisphaerica | exon |
| TCONS_00044033-exon-sc0004867-1575043694:2..273 | TCONS_00044033-exon-sc0004867-1575043694:2..273 | Clytia hemisphaerica | exon |
| TCONS_00044033-exon-sc0004867-1491911889:596..1284 | TCONS_00044033-exon-sc0004867-1491911889:596..1284 | Clytia hemisphaerica | exon |
| TCONS_00044033-exon-sc0004867-1510915933:596..1284 | TCONS_00044033-exon-sc0004867-1510915933:596..1284 | Clytia hemisphaerica | exon |
| TCONS_00044033-exon-sc0004867-1575043694:596..1284 | TCONS_00044033-exon-sc0004867-1575043694:596..1284 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004867 | supercontig | sc0004867:2..1284 + |
Blast
The following BLAST results are available for this feature:
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