TCONS_00043986 (transcript) - C. hemisphaerica

Overview
NameTCONS_00043986
Unique NameTCONS_00043986
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length154

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00043986 ID=TCONS_00043986|Name=TCONS_00043986|organism=Clytia hemisphaerica|type=transcript|length=154bp
AATCTCAAATCAATTTGTATGACGATATATCCCCCAATGACGGATAGGAA
TTATTCGTAAATGTGTATCCTCAAATCTCAAATCAAATTGTGTGACGATA
TATCCCCAAATGACGGATAGGAATTATTCGTAAATTTGTATCCAAAGTTT
TCCA
Run BLAST on NCBI

transcript from alignment at sc0004808:5292..5445

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00043986 ID=TCONS_00043986|Name=TCONS_00043986|organism=Clytia hemisphaerica|type=transcript|length=154bp|location=Sequence derived from alignment at sc0004808:5292..5445 (Clytia hemisphaerica)
TGGAAAACTTTGGATACAAATTTACGAATAATTCCTATCCGTCATTTGGG
GATATATCGTCACACAATTTGATTTGAGATTTGAGGATACACATTTACGA
ATAATTCCTATCCGTCATTGGGGGATATATCGTCATACAAATTGATTTGA
GATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_027646XLOC_027646Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00043986-exon-sc0004808-1491911889:5292..5445TCONS_00043986-exon-sc0004808-1491911889:5292..5445Clytia hemisphaericaexon
TCONS_00043986-exon-sc0004808-1510915933:5292..5445TCONS_00043986-exon-sc0004808-1510915933:5292..5445Clytia hemisphaericaexon
TCONS_00043986-exon-sc0004808-1575043694:5292..5445TCONS_00043986-exon-sc0004808-1575043694:5292..5445Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004808supercontigsc0004808:5292..5445 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00043986 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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