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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043897 ID=TCONS_00043897|Name=TCONS_00043897|organism=Clytia hemisphaerica|type=transcript|length=901bp
TCCCCAGTAGAGGAGAGGGAAAGCTTCTAAAAGGGCATCTCGCAAACTTT
GCTTTCTTATAAGCTCCTGATTTGTCACAAGCTCCTGATCTGTGACGTTT
CGAATGTTTGATGCAACTTTTAGAATGCgagagagagaaaaagtgaaaat
cacgTGAAAAGAAAGAGAACACACTCAGAAGGAGTGtatttcatcactat
ttttggtaaaagttttgggtggtacagtcactttcgatcggggttgtgga
cggcgaaatatgaaatttgttgttctttaaaaatttgtcgttctttttgt
cactttttaatagttatttgtcattctttttagatgatctggaaacgtta
gatgaacagtctcaaTATCCCCGTCTCAGTCAGTGGAAAtctctattttt
attttagacaATGTAATGTAATCTTTATAGCCAAAATTTGGTAAAACTTT
AACTGAATTCCACAAGCTTAAGCCGAATCCAATAATTACTTTTACCGGAT
TTAGTTAAACTTTCTACCGAAGCGATTAGGTTAAACAGCCGAATTTAACA
AAAACCATTTAACCGAAATTCGGTTATAtatttgagaagatccctaagat
ataagcgaaaaaggattaattaatcaaaTACAAGGAtttaaataatcgaa
tatgggggattaaaaataattgactATAGGAAATTAAATAGCCGAATCAT
TAATCGAACTTCATAAACGAAAAtcgattatatttttgagaagatcccta
aagaAGGCCGCTAAATAGGCTGCTGGCCGGTCTCTCGATCAAGAAAAAGA
CTCTAATAGAGGCCTTGAGGCCGTTCTTGGAAAAATTCCATTGGCCGCTT
CATGGCCGATCTTCTAAAATGTTAGGCCGCTTGAAATCTCACTTCGCCGG
C Run BLAST on NCBI transcript from alignment at sc0004708:19..919 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043897 ID=TCONS_00043897|Name=TCONS_00043897|organism=Clytia hemisphaerica|type=transcript|length=901bp|location=Sequence derived from alignment at sc0004708:19..919 (Clytia hemisphaerica)
GCCGGCGAAGTGAGATTTCAAGCGGCCTAACATTTTAGAAGATCGGCCAT
GAAGCGGCCAATGGAATTTTTCCAAGAACGGCCTCAAGGCCTCTATTAGA
GTCTTTTTCTTGATCGAGAGACCGGCCAGCAGCCTATTTAGCGGCCTtct
ttagggatcttctcaaaaatataatcgaTTTTCGTTTATGAAGTTCGATT
AATGATTCGGCTATTTAATTTCCTATagtcaattatttttaatcccccat
attcgattatttaaaTCCTTGTAtttgattaattaatcctttttcgctta
tatcttagggatcttctcaaataTATAACCGAATTTCGGTTAAATGGTTT
TTGTTAAATTCGGCTGTTTAACCTAATCGCTTCGGTAGAAAGTTTAACTA
AATCCGGTAAAAGTAATTATTGGATTCGGCTTAAGCTTGTGGAATTCAGT
TAAAGTTTTACCAAATTTTGGCTATAAAGATTACATTACATtgtctaaaa
taaaaatagagaTTTCCACTGACTGAGACGGGGATAttgagactgttcat
ctaacgtttccagatcatctaaaaagaatgacaaataactattaaaaagt
gacaaaaagaacgacaaatttttaaagaacaacaaatttcatatttcgcc
gtccacaaccccgatcgaaagtgactgtaccacccaaaacttttaccaaa
aatagtgatgaaataCACTCCTTCTGAGTGTGTTCTCTTTCTTTTCAcgt
gattttcactttttctctctctcGCATTCTAAAAGTTGCATCAAACATTC
GAAACGTCACAGATCAGGAGCTTGTGACAAATCAGGAGCTTATAAGAAAG
CAAAGTTTGCGAGATGCCCTTTTAGAAGCTTTCCCTCTCCTCTACTGGGG
A
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043897-exon-sc0004708-1491911889:19..919 | TCONS_00043897-exon-sc0004708-1491911889:19..919 | Clytia hemisphaerica | exon |
| TCONS_00043897-exon-sc0004708-1510915933:19..919 | TCONS_00043897-exon-sc0004708-1510915933:19..919 | Clytia hemisphaerica | exon |
| TCONS_00043897-exon-sc0004708-1575043694:19..919 | TCONS_00043897-exon-sc0004708-1575043694:19..919 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004708 | supercontig | sc0004708:19..919 . |
Blast
The following BLAST results are available for this feature:
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