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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043871 ID=TCONS_00043871|Name=TCONS_00043871|organism=Clytia hemisphaerica|type=transcript|length=1085bp
CTTGATTAATAATAAAGAACATAAAagagaaacatcaaaacatcaaattt
taaCGACTTTGTGAATGGCTTTCTCTTTATGAACACACATACACACGCAT
TAATTACATCCCATGTAAAATGATTTATGAGGATTTTTTTGTTTGCCATT
TTCTATTTCCTTTTTTTACGGACTCAacaaagatttcaaataaaagttaa
accatCAAACCATTGTTAGTCGTTTATTTCCATTGGAAAGGAAATGTTAC
GTGAAAACTTTACGGGACAAAATTTTTTACGCAGAGCAAAATTTTTACGc
tgtgaatattttttaaccagGCACAGGTGAAATCCTACGAGGGGTTAAAG
GGGACAATAATCGATTGACACAGAAAGTTATTCAGTGATGTATAATAAAA
TTAGTAATAGCCTCTTCAGTAATAGCCTcttaaaaatccttttcaaaacT
ATTCTCAAGTCAAACGTTAGATAAGTGGTCAAGCTTCAACTGAACCTTGC
TGGGAAAGAACAGGCCACTTTCAAAACGGGCAAAAAAGGGGAGCGCTCAC
ACTCCATCACTCAATCCATTCTTCCGTAAAAAATCCTCATTACCAAAATG
TAATAGAAAATAATATGCATATTATATAATATTAATTACAAAATATATAG
CAAGCTCAATGTGCTGTCatcttttcatttaaaaaattcaaaattgccTT
GGCcgcaaattgttttttttactcTTCTGAATTGCGGCCTTATAAAGGCA
GATGAGAAAGGTTTTCAATCGGGTGTAAATTTGGTGAATGGGCAGGGGCG
AGGATGCAAAATAAGTGTACCCAACGCGTTCCAAGGCATGTATTCCCTTT
TTAGAGTTTTCTTCAAAACAACCATCACTCTTTTCGCATTTGGATTTATG
CAAACATAGTCCGtctaaaaaaccctggtctcgAAGCCTTTTGTTTATTT
CTGTTGTTAATAGCTTGAACTTGCGTACATATAAATTGGTTTGTTTTact
cagtttttgatcatgtTATTAAATAATGAACCAATCCCATGAGGAgaatt
tggtaacgtgatcaaaaactgagcaaatcgattat Run BLAST on NCBI transcript from alignment at sc0004686:1397..2481 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043871 ID=TCONS_00043871|Name=TCONS_00043871|organism=Clytia hemisphaerica|type=transcript|length=1085bp|location=Sequence derived from alignment at sc0004686:1397..2481 (Clytia hemisphaerica)
ataatcgatttgctcagtttttgatcacgttaccaaattcTCCTCATGGG
ATTGGTTCATTATTTAATAacatgatcaaaaactgagtAAAACAAACCAA
TTTATATGTACGCAAGTTCAAGCTATTAACAACAGAAATAAACAAAAGGC
TTcgagaccagggttttttagaCGGACTATGTTTGCATAAATCCAAATGC
GAAAAGAGTGATGGTTGTTTTGAAGAAAACTCTAAAAAGGGAATACATGC
CTTGGAACGCGTTGGGTACACTTATTTTGCATCCTCGCCCCTGCCCATTC
ACCAAATTTACACCCGATTGAAAACCTTTCTCATCTGCCTTTATAAGGCC
GCAATTCAGAAgagtaaaaaaaacaatttgcgGCCAAggcaattttgaat
tttttaaatgaaaagatGACAGCACATTGAGCTTGCTATATATTTTGTAA
TTAATATTATATAATATGCATATTATTTTCTATTACATTTTGGTAATGAG
GATTTTTTACGGAAGAATGGATTGAGTGATGGAGTGTGAGCGCTCCCCTT
TTTTGCCCGTTTTGAAAGTGGCCTGTTCTTTCCCAGCAAGGTTCAGTTGA
AGCTTGACCACTTATCTAACGTTTGACTTGAGAATAgttttgaaaaggat
ttttaagAGGCTATTACTGAAGAGGCTATTACTAATTTTATTATACATCA
CTGAATAACTTTCTGTGTCAATCGATTATTGTCCCCTTTAACCCCTCGTA
GGATTTCACCTGTGCctggttaaaaaatattcacagCGTAAAAATTTTGC
TCTGCGTAAAAAATTTTGTCCCGTAAAGTTTTCACGTAACATTTCCTTTC
CAATGGAAATAAACGACTAACAATGGTTTGatggtttaacttttatttga
aatctttgtTGAGTCCGTAAAAAAAGGAAATAGAAAATGGCAAACAAAAA
AATCCTCATAAATCATTTTACATGGGATGTAATTAATGCGTGTGTATGTG
TGTTCATAAAGAGAAAGCCATTCACAAAGTCGttaaaatttgatgttttg
atgtttctctTTTATGTTCTTTATTATTAATCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043871-exon-sc0004686-1491911889:1397..2481 | TCONS_00043871-exon-sc0004686-1491911889:1397..2481 | Clytia hemisphaerica | exon |
| TCONS_00043871-exon-sc0004686-1510915933:1397..2481 | TCONS_00043871-exon-sc0004686-1510915933:1397..2481 | Clytia hemisphaerica | exon |
| TCONS_00043871-exon-sc0004686-1575043694:1397..2481 | TCONS_00043871-exon-sc0004686-1575043694:1397..2481 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004686 | supercontig | sc0004686:1397..2481 . |
Blast
The following BLAST results are available for this feature:
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