|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043806 ID=TCONS_00043806|Name=TCONS_00043806|organism=Clytia hemisphaerica|type=transcript|length=1388bp
gtttgtaagtgcactttatagttttgattcccattgaagaatcatattct
ggttttcatgttattagatgctgttttagagctttaggtctacactgtac
tttctgtcataacatgtcacgataacttttactgatagtgcacccttttt
aactttaacttttttgttttcattcaaaacgaccggacgccgattggaga
attagagaaaaTCAGAAAACCGGGCTGAAATTTCAGATTTCACTTGGAAA
ATTTTGTCTCACGCAAAATGAACATCTTAAGTTAGCAGGTCTGTAAAAGG
TAGATCAGGAGGtttaaagattttgatgaaaGTTTGTACTATCTCCATGt
aactttccaaaaaccaagATTCCATTGTCTTATAGGACTCATTTTGTGTT
TAATCTTGtgcaaaaattgttgttttgagcaTCATTGTCAAGATGTTTAG
GAATTTTAGAGTTAAGAAGGATTTTGAGCTAGGCCTGATTTTTAAAGGAG
TGGAAAAGGCGTCAAATTTCTGATAAATTATAATTGCACTATCTATAGGA
AAAGTACAAAATTAAGAATCAATTATCAATGGATGCTcattttcgacaaa
aatttcagccaaaaatgtactttaataagtcaattttacaaaattatggG
GTCAGGGGAGTTAGAAGCCACCTTTGAGTGAAATTTCAGCCTCCCTAAGT
CAGGGCATGAAATAACAGTCGGACATCAGACATTGTCCGGCCCAATCGAT
GAATGTCCAACTAAAATAGATTCTGATCGGACACAATATCCAACCACAGC
CAACCCATGTTTTCAGTTCcttaaaaattcaaacaaattcaAACATTATT
TACATAAATTTGAAATTAGCAACCTTCTCATTTACACAGAGAAACTCTCT
GCAGTTAAAAATGTTCTCTATTCGTTGTGTTTGAAAGCAAACAATTCATC
CTTTTTCAAGCTTGCTTCAAGTCAAAATCATAGTGCAAAAAATGCCCTTC
ACTAAAGTCTTTCTAAATTTCTACTTTTTAGCTTgtctaatatttttaaa
accACCAATCATCAATGTTTGGACCAAAAGAATCTTTTGCTAATTTTTGT
CCGAACTTGACAGTCAGCTTTcttttcatataaaatttacagGAAACCca
tatttggattttgaatttACAAAAACTGCAAATTGAATTAACAATTTTGA
CCACCCAACTTAGAACCTGGTACTAAGTTATCTTTTACTTGCCAATTTTA
AACACACATTTGGCAGTGGCTCCTCACCATGATTAAGTAAGTTTCCTTCA
TCCAAATTCTACTAATATTATTGTTGGATCCATCTATAAACACCCTCTTT
TTTCGCTTGATGAATTCAATAAACTTCTTGAACCACTT Run BLAST on NCBI transcript from alignment at sc0004603:3..1390 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043806 ID=TCONS_00043806|Name=TCONS_00043806|organism=Clytia hemisphaerica|type=transcript|length=1388bp|location=Sequence derived from alignment at sc0004603:3..1390 (Clytia hemisphaerica)
AAGTGGTTCAAGAAGTTTATTGAATTCATCAAGCGAAAAAAGAGGGTGTT
TATAGATGGATCCAACAATAATATTAGTAGAATTTGGATGAAGGAAACTT
ACTTAATCATGGTGAGGAGCCACTGCCAAATGTGTGTTTAAAATTGGCAA
GTAAAAGATAACTTAGTACCAGGTTCTAAGTTGGGTGGTCAAAATTGTTA
ATTCAATTTGCAGTTTTTGTaaattcaaaatccaaatatgGGTTTCctgt
aaattttatatgaaaagAAAGCTGACTGTCAAGTTCGGACAAAAATTAGC
AAAAGATTCTTTTGGTCCAAACATTGATGATTGGTggttttaaaaatatt
agacAAGCTAAAAAGTAGAAATTTAGAAAGACTTTAGTGAAGGGCATTTT
TTGCACTATGATTTTGACTTGAAGCAAGCTTGAAAAAGGATGAATTGTTT
GCTTTCAAACACAACGAATAGAGAACATTTTTAACTGCAGAGAGTTTCTC
TGTGTAAATGAGAAGGTTGCTAATTTCAAATTTATGTAAATAATGTTtga
atttgtttgaatttttaagGAACTGAAAACATGGGTTGGCTGTGGTTGGA
TATTGTGTCCGATCAGAATCTATTTTAGTTGGACATTCATCGATTGGGCC
GGACAATGTCTGATGTCCGACTGTTATTTCATGCCCTGACTTAGGGAGGC
TGAAATTTCACTCAAAGGTGGCTTCTAACTCCCCTGACCccataattttg
taaaattgacttattaaagtacatttttggctgaaatttttgtcgaaaat
gAGCATCCATTGATAATTGATTCTTAATTTTGTACTTTTCCTATAGATAG
TGCAATTATAATTTATCAGAAATTTGACGCCTTTTCCACTCCTTTAAAAA
TCAGGCCTAGCTCAAAATCCTTCTTAACTCTAAAATTCCTAAACATCTTG
ACAATGAtgctcaaaacaacaatttttgcaCAAGATTAAACACAAAATGA
GTCCTATAAGACAATGGAATcttggtttttggaaagttaCATGGAGATAG
TACAAACtttcatcaaaatctttaaaCCTCCTGATCTACCTTTTACAGAC
CTGCTAACTTAAGATGTTCATTTTGCGTGAGACAAAATTTTCCAAGTGAA
ATCTGAAATTTCAGCCCGGTTTTCTGAttttctctaattctccaatcggc
gtccggtcgttttgaatgaaaacaaaaaagttaaagttaaaaagggtgca
ctatcagtaaaagttatcgtgacatgttatgacagaaagtacagtgtaga
cctaaagctctaaaacagcatctaataacatgaaaaccagaatatgattc
ttcaatgggaatcaaaactataaagtgcacttacaaac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043806-exon-sc0004603-1491911889:3..1390 | TCONS_00043806-exon-sc0004603-1491911889:3..1390 | Clytia hemisphaerica | exon |
| TCONS_00043806-exon-sc0004603-1510915933:3..1390 | TCONS_00043806-exon-sc0004603-1510915933:3..1390 | Clytia hemisphaerica | exon |
| TCONS_00043806-exon-sc0004603-1575043694:3..1390 | TCONS_00043806-exon-sc0004603-1575043694:3..1390 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004603 | supercontig | sc0004603:3..1390 . |
Blast
The following BLAST results are available for this feature:
|
