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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043488 ID=TCONS_00043488|Name=TCONS_00043488|organism=Clytia hemisphaerica|type=transcript|length=388bp
TATTTTCTGTCTTTTAGCTTCTTGAGAGGAAAGACGTTGCAGAACATGAT
AATTACCATCAATGAAAAGGCTTAGTTTCATTGACAGCTATTGTGGCGTT
ACATGTTCATTATTGACGTTGTGGAAcatttcaaagaaaacaaatgCTTT
GACGCAGCCAGATGGATAGCATGAGCGGTGGTTcaaataatgaaaacttt
ttgctcGAAGAAAAATGCTTATTTCAAGtACCATTGCCCAATATGACACC
GATTGACGTCCTAACGAGACAAAAAATATACCTGCGTCGGAGCATATCCC
GAACAACCTTACAAGTTATCTTTGTattgtatttaatttttcatttttta
acaacAATGAAAATATATGGTCGAAGCAAGACTTAATC Run BLAST on NCBI transcript from alignment at sc0004286:5970..7661- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043488 ID=TCONS_00043488|Name=TCONS_00043488|organism=Clytia hemisphaerica|type=transcript|length=1692bp|location=Sequence derived from alignment at sc0004286:5970..7661- (Clytia hemisphaerica)
TATTTTCTGTCTTTTAGCTTCTTGAGAGGAAAGACGTTGCAGAACATGAT
AATTACCATCAATGAAAAGGCTTAGTTTCATTGACAGCTATTGTGGCGTT
ACATGTAAGATTTTAACATAATTTTTAAACACTCAATAGTAAAATTTCTC
TCTGAATAAGCTTAAACCGCAGGTAGGTAGGTGGATATATGACTCATTTC
GAGCTAGTACTCATTGAATTTTGGTATTTGGTAGGTAAAATGGGGGGAAA
TTTTGGTGAATCAAAATAGAAATTTTGCCAATTTTCTGAAGAATTCCTGA
AAACAATCAGGTTTCACTCATCAGATATTTTTTAATTTTCATACACGCTT
TTTTTATATAAGAATAGTGTACTTTGGATGAGGGTTAAGTATTCTTAAGA
AAGTGCCAAAATTGAGGTTGAAATATTCTTAATATATTCTTACTTTTTTA
GACTTGACTTTTTCAAACATGAGAAATGATCAATTTGAGAGTTTTGGGCT
TTTGAGTGAACATTTGGGTTAAAATTACATTTTTTCCTCGAAGCTTCAAT
TTATCTCTAACAAAGGAAACAGTTTTTTCTGTTAACCAAATACAAAATGA
CTGTATTCTTATCAAATTCTGTGAAATTCACCTTAGAGAGGGTATTCTTA
GGGTATTCTTACGATTTGGCCAATTTTCTAGTCTTATAGAAGATATTCTT
ATAAAAAACGCGTGTATTTTATAAATTTGACGAATCGAATTGTTGCAAAA
AACTTTCCACGTTTTAAGCTCCTCCACATTTTAAGAAGCTCTTCCACATT
TTTGTGAGCTAAAATTGACTGATAGGTATTACGAGATATTTTCCCAGGGT
TATGTAGCCGTATTTTCTCTGGTATTGGGCTTCTAATTAGGGAGTGGTTA
GTACATAGGTACTAAAAAGGGGGTGGTGGTACCTAAGAAAATTTTTTCTG
AAAATCAGGGTTAGTATCCTGCGGCTACACCCCCTCCCCTTCCACTCTGT
TTACACTACATTGAAAATATTAGACCTTTTAGAAAATATCCATTCGAAAA
CTCTTTAATCTTGGAAAATCTCTGGTATCTTCATAACCCTGGTCGATTCC
CATTCCAATCGTTTCTTTTTATCGCTGACCAGCTAAGACTGAAATGTTAA
TGTAAGTCTCTTTCTTCCAATGTAGGTTCATTATTGACGTTGTGGAACAT
TTCAAAGAAAACAAATGCTTTGACGCAGCCAGATGGATAGCATGAGCGGT
GGTTCAAATAATGAAAACTTTTTGCTCGAAGAAAAATGCTTATTTCAAGG
TATATATATTATAATAATATTTTGGATATAAATATTTCAATAAATAATTT
TTAAAACTTCCATATGCATTGTTAAAAAGGTAATGAAGTAAGTAAAGAGT
GTATTGAAGTAGATGAGACTAAAGAATAAAACTGAAGTGGAATGAAACAG
AAAATGTTGAAAAGGGCTTGAAATTTACCTATCAATTTCTTGATGTTCAA
CTTTCCTTATGTTAATTTTTTTCTCTCTTTAGTACCATTGCCCAATATGA
CACCGATTGACGTCCTAACGAGACAAAAAATATACCTGCGTCGGAGCATA
TCCCGAACAACCTTACAAGTTATCTTTGTATTGTATTTAATTTTTCATTT
TTTAACAACAATGAAAATATATGGTCGAAGCAAGACTTAATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043488-exon-sc0004286-1575043694:7558..7661 | TCONS_00043488-exon-sc0004286-1575043694:7558..7661 | Clytia hemisphaerica | exon |
| TCONS_00043488-exon-sc0004286-1575043694:6363..6486 | TCONS_00043488-exon-sc0004286-1575043694:6363..6486 | Clytia hemisphaerica | exon |
| TCONS_00043488-exon-sc0004286-1575043694:5970..6129 | TCONS_00043488-exon-sc0004286-1575043694:5970..6129 | Clytia hemisphaerica | exon |
| TCONS_00043488-exon-sc0004286-1510915933:7558..7661 | TCONS_00043488-exon-sc0004286-1510915933:7558..7661 | Clytia hemisphaerica | exon |
| TCONS_00043488-exon-sc0004286-1510915933:6363..6486 | TCONS_00043488-exon-sc0004286-1510915933:6363..6486 | Clytia hemisphaerica | exon |
| TCONS_00043488-exon-sc0004286-1510915933:5970..6129 | TCONS_00043488-exon-sc0004286-1510915933:5970..6129 | Clytia hemisphaerica | exon |
| TCONS_00043488-exon-sc0004286-1491911889:7558..7661 | TCONS_00043488-exon-sc0004286-1491911889:7558..7661 | Clytia hemisphaerica | exon |
| TCONS_00043488-exon-sc0004286-1491911889:6363..6486 | TCONS_00043488-exon-sc0004286-1491911889:6363..6486 | Clytia hemisphaerica | exon |
| TCONS_00043488-exon-sc0004286-1491911889:5970..6129 | TCONS_00043488-exon-sc0004286-1491911889:5970..6129 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004286 | supercontig | sc0004286:5970..7661 - |
Blast
The following BLAST results are available for this feature:
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