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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043436 ID=TCONS_00043436|Name=TCONS_00043436|organism=Clytia hemisphaerica|type=transcript|length=1106bp
CTCCGTAGCTCACCATCGGGTGAGAATTTCAAAGTTTCGACCAAAGCAAT
TCTGATCAATTCCTAGCAATGTCTATATCTCTCAGAAAATGGATCCTATT
AGCTTTACAAGGAAATGGGAAGGAGGGGAAATAAAGAAGTAACAATGTTC
TTCATGTTCAATACTTTTAAcaagcaaaatgtttttctaaaaatttcatA
GGTAAGCTTTTTAACAGTGgctattaaaaacaaaaaaactacttctaTGT
TCCGTTCGGCCTCAAGTCCAAGCACttgtttttgtcaaaaatagaTATCA
AGCTAATTTTAGTTTCAAGACTTACTCATTCCACAAATTTGCTTCTGATA
GCTGAAGAAGAGACCAACCAAAACATTTTATATAGAATGTTCCTTCTACt
ctaaaaataatatttacaaCCCATAATATGCGGAagataaagtaaaataa
aagtctataaatatttcagttttATGTACATAGTTTTCTGAGGGTTAAAA
CTACACACTAAATGAGGGTTAAAtgctaaaataaaataaaaacatgatct
ATGAAGCCGTGAACACAGAAAGAAGCTCGAAGTAGAGTCTCATGATTAAT
TTTCTCTAAAGTCTGAATcgtcaaaaaggaaaaaaactttGTCAACGACA
CAAGGTTTAGAGCTAACGCTTACAGAATTCAAAATGTCCAAGCCTTTGGA
ATTTCATAGTTTTCGTGTCACAATATTGCAAAATCGGACAGGGTACAGTT
GGGAGTAGGCAAGGGTCGGGAAAACAAACGCATGTATAATCCTATAAAAA
GATAGCCTGATAACTGAGTCactaattcgaaaaaaataatttcgctctac
gtaaacaaaaataaaatctatgaCATAAGATGTAGGCcagaaagattgaa
aaaaaatagaaacaaaatGAACGTCTTTTTGGAGAGTTGAATGTATAAGG
AACACAAGCTGGGTGTCAAAAGCTTACTTTGAACACCGTCTCACATTGGT
GGAAAGTTAGTCTGGTGAAAATCTGGAATGAACTTTTGTTCAATCTTCAT
CAGATCATTCTTAGGTTTGTGTCTGTTTTCAATGTGTTTCTTCATGTCGT
GTGCTG Run BLAST on NCBI transcript from alignment at sc0004221:1..1106 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043436 ID=TCONS_00043436|Name=TCONS_00043436|organism=Clytia hemisphaerica|type=transcript|length=1106bp|location=Sequence derived from alignment at sc0004221:1..1106 (Clytia hemisphaerica)
CAGCACACGACATGAAGAAACACATTGAAAACAGACACAAACCTAAGAAT
GATCTGATGAAGATTGAACAAAAGTTCATTCCAGATTTTCACCAGACTAA
CTTTCCACCAATGTGAGACGGTGTTCAAAGTAAGCTTTTGACACCCAGCT
TGTGTTCCTTATACATTCAACTCTCCAAAAAGACGTTCattttgtttcta
ttttttttcaatctttctgGCCTACATCTTATGtcatagattttattttt
gtttacgtagagcgaaattatttttttcgaattagtGACTCAGTTATCAG
GCTATCTTTTTATAGGATTATACATGCGTTTGTTTTCCCGACCCTTGCCT
ACTCCCAACTGTACCCTGTCCGATTTTGCAATATTGTGACACGAAAACTA
TGAAATTCCAAAGGCTTGGACATTTTGAATTCTGTAAGCGTTAGCTCTAA
ACCTTGTGTCGTTGACaaagtttttttcctttttgacgATTCAGACTTTA
GAGAAAATTAATCATGAGACTCTACTTCGAGCTTCTTTCTGTGTTCACGG
CTTCATagatcatgtttttattttattttagcaTTTAACCCTCATTTAGT
GTGTAGTTTTAACCCTCAGAAAACTATGTACATaaaactgaaatatttat
agacttttattttactttatctTCCGCATATTATGGGttgtaaatattat
ttttagaGTAGAAGGAACATTCTATATAAAATGTTTTGGTTGGTCTCTTC
TTCAGCTATCAGAAGCAAATTTGTGGAATGAGTAAGTCTTGAAACTAAAA
TTAGCTTGATAtctatttttgacaaaaacaaGTGCTTGGACTTGAGGCCG
AACGGAACAtagaagtagtttttttgtttttaatagcCACTGTTAAAAAG
CTTACCTatgaaatttttagaaaaacattttgcttgTTAAAAGTATTGAA
CATGAAGAACATTGTTACTTCTTTATTTCCCCTCCTTCCCATTTCCTTGT
AAAGCTAATAGGATCCATTTTCTGAGAGATATAGACATTGCTAGGAATTG
ATCAGAATTGCTTTGGTCGAAACTTTGAAATTCTCACCCGATGGTGAGCT
ACGGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043436-exon-sc0004221-1491911889:1..1106 | TCONS_00043436-exon-sc0004221-1491911889:1..1106 | Clytia hemisphaerica | exon |
| TCONS_00043436-exon-sc0004221-1510915933:1..1106 | TCONS_00043436-exon-sc0004221-1510915933:1..1106 | Clytia hemisphaerica | exon |
| TCONS_00043436-exon-sc0004221-1575043694:1..1106 | TCONS_00043436-exon-sc0004221-1575043694:1..1106 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004221 | supercontig | sc0004221:1..1106 . |
Blast
The following BLAST results are available for this feature:
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