TCONS_00043425 (transcript) - C. hemisphaerica

Overview
NameTCONS_00043425
Unique NameTCONS_00043425
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length151

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00043425 ID=TCONS_00043425|Name=TCONS_00043425|organism=Clytia hemisphaerica|type=transcript|length=151bp
atatttttaatatatttttcgatatttttagattttgaatcTGTAAATAT
GTGTGTTATTCAAAATTTATCTTCAACCAGAGTGatttataataatttta
taaTATAGATAGGTGATTCATTTAATCAAAACTATTTtgcaacaaaaatc
a
Run BLAST on NCBI

transcript from alignment at sc0004212:7908..8058

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00043425 ID=TCONS_00043425|Name=TCONS_00043425|organism=Clytia hemisphaerica|type=transcript|length=151bp|location=Sequence derived from alignment at sc0004212:7908..8058 (Clytia hemisphaerica)
tgatttttgttgcaAAATAGTTTTGATTAAATGAATCACCTATCTATAtt
ataaaattattataaatCACTCTGGTTGAAGATAAATTTTGAATAACACA
CATATTTACAgattcaaaatctaaaaatatcgaaaaatatattaaaaata
t
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_027123XLOC_027123Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00043425-exon-sc0004212-1491911889:7908..8058TCONS_00043425-exon-sc0004212-1491911889:7908..8058Clytia hemisphaericaexon
TCONS_00043425-exon-sc0004212-1510915933:7908..8058TCONS_00043425-exon-sc0004212-1510915933:7908..8058Clytia hemisphaericaexon
TCONS_00043425-exon-sc0004212-1575043694:7908..8058TCONS_00043425-exon-sc0004212-1575043694:7908..8058Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004212supercontigsc0004212:7908..8058 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00043425 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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