TCONS_00043424 (transcript) - C. hemisphaerica

Overview
NameTCONS_00043424
Unique NameTCONS_00043424
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length126

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00043424 ID=TCONS_00043424|Name=TCONS_00043424|organism=Clytia hemisphaerica|type=transcript|length=126bp
TACCGCCATTACCAGATGATCTTTGATATTTCTCTAGAAGATATTCAAAT
TCGAACTCTAAAGAATATATGAACTCTACGGATGCCTCAAGACTAATGAA
AGGACAGCCATGCAACTTGAGCGGTG
Run BLAST on NCBI

transcript from alignment at sc0004212:4320..4445

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00043424 ID=TCONS_00043424|Name=TCONS_00043424|organism=Clytia hemisphaerica|type=transcript|length=126bp|location=Sequence derived from alignment at sc0004212:4320..4445 (Clytia hemisphaerica)
CACCGCTCAAGTTGCATGGCTGTCCTTTCATTAGTCTTGAGGCATCCGTA
GAGTTCATATATTCTTTAGAGTTCGAATTTGAATATCTTCTAGAGAAATA
TCAAAGATCATCTGGTAATGGCGGTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_027122XLOC_027122Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00043424-exon-sc0004212-1491911889:4320..4445TCONS_00043424-exon-sc0004212-1491911889:4320..4445Clytia hemisphaericaexon
TCONS_00043424-exon-sc0004212-1510915933:4320..4445TCONS_00043424-exon-sc0004212-1510915933:4320..4445Clytia hemisphaericaexon
TCONS_00043424-exon-sc0004212-1575043694:4320..4445TCONS_00043424-exon-sc0004212-1575043694:4320..4445Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004212supercontigsc0004212:4320..4445 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00043424 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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