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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043392 ID=TCONS_00043392|Name=TCONS_00043392|organism=Clytia hemisphaerica|type=transcript|length=400bp
TGAAGTTCTTTTGAATCAGATGTGCATGTTGTTAGTCATTTTAATGCCAA
AACAACATCAACAGTCAAAACATTCTAAACCATGTTTAAACTGTAGAAAT
TATGATTCAATTggactttcatttttttgttttgttttttgtgatTACTT
TCAAAGCTTCTCAAttgtcttaaaaaaaatggaaagcATAATGCTAAAGT
AGTTTAAAAAAGAAAGCCTTGTGTACTACAACTTCTgaataatatttttg
taaactaAATAATTTCGTTTGAGATAAATTTGTTCTGCAAAGTTTTTTTG
TGCATGAAAGTTATCTGGAGGTGTTGAGATTTTCTCTACTAgcacTAAAG
TGATGTTGCGTGTACATGGACATTGTTTGAATTTCAAGGAAATTAACCCT Run BLAST on NCBI transcript from alignment at sc0004184:2077..2774+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043392 ID=TCONS_00043392|Name=TCONS_00043392|organism=Clytia hemisphaerica|type=transcript|length=698bp|location=Sequence derived from alignment at sc0004184:2077..2774+ (Clytia hemisphaerica)
TGAAGTTCTTTTGAATCAGATGTGCATGTTGTTAGTCATTTTAATGCCAA
AACAACATCAACAGTCAAAACATTCTAAACCATGTTTAAACTGTAGAAAT
TATGATTCAATTggactttcatttttttgttttgttttttgtgatTACTT
TCAAAGCTTCTCAAttgtcttaaaaaaaatggaaagcATAATGCTAAAGT
AGTTTAAAAAAGAAAGCCTTGTGTACTACAACTTCTgaataatatttttg
taaactaAATAATTTCGTTTGAGATAAATTTGTTCTGCAAAGTTTTTTTG
TGCATGAAAGTTATCTGGAGGTGTTGAGATTTTCTCTACTAggcaagtta
aattttttttagataaatctTTAATTATAAGTGCAATTTTATGCTAATCA
GTAACCAGTCAGTTAGCCATGGGCAGATATATTTTGGATTGCATTTTCCA
TTATCCTGTTTAGCCTGAATTTCTTGgttgtaaactttttttgatcttTC
CCCTATTAACTCTGCCTAAATCCTTGTTGTAAAGCCATGGCATGGCCAAA
AAATCTATAGCTTCACCCAACAATTGAATTAACACTTTTTGTTATTAATG
CTAATAATTATAaagtatttatatttattttttattttagcacTAAAGTG
ATGTTGCGTGTACATGGACATTGTTTGAATTTCAAGGAAATTAACCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043392-exon-sc0004184-1491911889:2077..2418 | TCONS_00043392-exon-sc0004184-1491911889:2077..2418 | Clytia hemisphaerica | exon |
| TCONS_00043392-exon-sc0004184-1510915933:2077..2418 | TCONS_00043392-exon-sc0004184-1510915933:2077..2418 | Clytia hemisphaerica | exon |
| TCONS_00043392-exon-sc0004184-1575043694:2077..2418 | TCONS_00043392-exon-sc0004184-1575043694:2077..2418 | Clytia hemisphaerica | exon |
| TCONS_00043392-exon-sc0004184-1491911889:2717..2774 | TCONS_00043392-exon-sc0004184-1491911889:2717..2774 | Clytia hemisphaerica | exon |
| TCONS_00043392-exon-sc0004184-1510915933:2717..2774 | TCONS_00043392-exon-sc0004184-1510915933:2717..2774 | Clytia hemisphaerica | exon |
| TCONS_00043392-exon-sc0004184-1575043694:2717..2774 | TCONS_00043392-exon-sc0004184-1575043694:2717..2774 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004184 | supercontig | sc0004184:2077..2774 + |
Blast
The following BLAST results are available for this feature:
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