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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043313 ID=TCONS_00043313|Name=TCONS_00043313|organism=Clytia hemisphaerica|type=transcript|length=1166bp
ATGGTTCTTCATTGATATTATTCCATTCAAACTACCACACTCGTGATGTT
GTTGAAAACAAACCTCCAATTTCACTAGAATCACTTTTGAggtgaaacat
ttggtttggaAGATGGATGTGTTTGTGtggacaagaaaaataaaacagat
TAGATTaagaagaagtttattattgtttcaattactCTTAATCTATGATA
ACAGTTGATAGCATGTCCCAACCAAGATCACTCACTGCACATGGCGACCT
AACCAACCCAATGTATTAATTGCCAGATCAAGTTATACCATGAATTTCTT
TAGCTACAATTAGCAGATTTGAAGTGAAGCAAAAGAACATTTATCACCTA
AACGCTAAAGCAAGATTTGATTGACGATTCACCGTTCCAAGACGAGCAAT
TTTGTGTAACCATTGCGAGTATTGACTTAAAATTTCTTGAACAAACATAC
AACTGTCGGCTGTTTGGCAGCCagtttgtttcttttatttcgGGCTCACT
TTTTGGGCCATTTCAAGATATTGTCCAGTTGTCAACTGCAATTATTGGAG
TCTATGCCCGGCTGAACAACTGTCTCTATGTAGGTCATTACTGGCATCTA
GTCAAAAGTGAAAGTGACGTTATGTATTCTTTCTCCTGGAATGGCCCTTT
TGATTATTATTGTTGTTTCCCTTGCATCCATTGAAACATGGAGTTATCAA
GATATTTGCTAGAGTTTTAATTACACGTGACATTGCAACTACATTGGCGA
GAATTTAATaattggcggatggccgaaaaagttttttcagagggaattta
atttggtggttaagttaaggcggcaatcacaaatatcttcgtttctcGTC
GCTCaaccgactctcgaaaattgagtagaattgagtccgtgagtcggtaa
atttgtcggactttttctgtcgatgacgtttttttcgtttaaaaacttta
ttattgccgattttttgcgagcgatttctagcgcattcgcagcattttga
ctttgtttatatcattacatgcgccattttgggtctgaggtcacagtgtt
caaaggtcataatagaccttttttcaaagaggccaccctgttgaataatt
atgtagtccagcagaaaaacaatgataaaaccatgcataattattacaat
atgcatGGTACAGTAA Run BLAST on NCBI transcript from alignment at sc0004116:1025..2190 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043313 ID=TCONS_00043313|Name=TCONS_00043313|organism=Clytia hemisphaerica|type=transcript|length=1166bp|location=Sequence derived from alignment at sc0004116:1025..2190 (Clytia hemisphaerica)
TTACTGTACCatgcatattgtaataattatgcatggttttatcattgttt
ttctgctggactacataattattcaacagggtggcctctttgaaaaaagg
tctattatgacctttgaacactgtgacctcagacccaaaatggcgcatgt
aatgatataaacaaagtcaaaatgctgcgaatgcgctagaaatcgctcgc
aaaaaatcggcaataataaagtttttaaacgaaaaaaacgtcatcgacag
aaaaagtccgacaaatttaccgactcacggactcaattctactcaatttt
cgagagtcggttGAGCGACgagaaacgaagatatttgtgattgccgcctt
aacttaaccaccaaattaaattccctctgaaaaaactttttcggccatcc
gccaattATTAAATTCTCGCCAATGTAGTTGCAATGTCACGTGTAATTAA
AACTCTAGCAAATATCTTGATAACTCCATGTTTCAATGGATGCAAGGGAA
ACAACAATAATAATCAAAAGGGCCATTCCAGGAGAAAGAATACATAACGT
CACTTTCACTTTTGACTAGATGCCAGTAATGACCTACATAGAGACAGTTG
TTCAGCCGGGCATAGACTCCAATAATTGCAGTTGACAACTGGACAATATC
TTGAAATGGCCCAAAAAGTGAGCCcgaaataaaagaaacaaactGGCTGC
CAAACAGCCGACAGTTGTATGTTTGTTCAAGAAATTTTAAGTCAATACTC
GCAATGGTTACACAAAATTGCTCGTCTTGGAACGGTGAATCGTCAATCAA
ATCTTGCTTTAGCGTTTAGGTGATAAATGTTCTTTTGCTTCACTTCAAAT
CTGCTAATTGTAGCTAAAGAAATTCATGGTATAACTTGATCTGGCAATTA
ATACATTGGGTTGGTTAGGTCGCCATGTGCAGTGAGTGATCTTGGTTGGG
ACATGCTATCAACTGTTATCATAGATTAAGagtaattgaaacaataataa
acttcttcttAATCTAatctgttttatttttcttgtccaCACAAACACAT
CCATCTtccaaaccaaatgtttcaccTCAAAAGTGATTCTAGTGAAATTG
GAGGTTTGTTTTCAACAACATCACGAGTGTGGTAGTTTGAATGGAATAAT
ATCAATGAAGAACCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043313-exon-sc0004116-1491911889:1025..2190 | TCONS_00043313-exon-sc0004116-1491911889:1025..2190 | Clytia hemisphaerica | exon |
| TCONS_00043313-exon-sc0004116-1510915933:1025..2190 | TCONS_00043313-exon-sc0004116-1510915933:1025..2190 | Clytia hemisphaerica | exon |
| TCONS_00043313-exon-sc0004116-1575043694:1025..2190 | TCONS_00043313-exon-sc0004116-1575043694:1025..2190 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004116 | supercontig | sc0004116:1025..2190 . |
Blast
The following BLAST results are available for this feature:
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