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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043290 ID=TCONS_00043290|Name=TCONS_00043290|organism=Clytia hemisphaerica|type=transcript|length=434bp
CCGAACCATCAATTGGACAAATTGAATTGGGAATGGAAGAGGCTAAAGGA
ATTTTCAATTCCAAAAGATACACTGTTGAGACAGAAGATTTGATACCCAT
CCGCCAATCAAATCGCTTGTATCTAtcgtccgccattttgaatttttgtg
gaGATTTCAACATTTTGGATACGGTTATTGACACAGAGGCCATGAAGGAA
GttcttaaaaagaaattcatCGCTCATTTCAAACTCAGACGGAGCAAACG
TCTTAACGTTAACGAATATGCTTATTGCAAAAATGGCGTCGCGACTATGA
GCTCTGTTATGACGCAATGTTATGGTAAATCCAGTGATCATTATGAAATG
AAGTGTAAAGTCAACCCATCCAAAACCTGTATTTATAAGGTTAATTGTTC
ATTGACGAATCAAGGTTGGAATTGCCCTGGCGTC Run BLAST on NCBI transcript from alignment at sc0004098:1..1387+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043290 ID=TCONS_00043290|Name=TCONS_00043290|organism=Clytia hemisphaerica|type=transcript|length=1387bp|location=Sequence derived from alignment at sc0004098:1..1387+ (Clytia hemisphaerica)
CCGAACCATCAATTGGACAAATTGAATTGGGAATGGAAGAGGTAACACTT
TATAGCAAAACGTGCCAAAGCACAAACACTACACATAACATATGGTAGTA
ATAGAACATTAAAAGATTGAAACACTTGACTCTTCTTcctgtaaaaatat
cgactgTTTGCCTTATCAGAATTCTCTTATAGGACAGAAGGAGTCTTTAA
ACAAAGTACTTTGAAACTTGACATTGCAATGGAGGATGGACTAACTGTCT
ATTCAATTTTCCACTACAGGCTAAAGGAATTTTCAATTCCAAAAGATACA
CTGTTGAGACAGAAGATTTGATACCCATCCGCCAATCAAATCGCTTGTAT
CTAtcgtccgccattttgaatttttgtggaGATTTCAACATTTTGGATAC
GGTTATTGACACAGAGGCCATGAAGGAAGttcttaaaaagaaattcatCG
GTAAGAAAACATTTACCCACAGAATAGGTATTAGCTTTAACGTTTGTACA
AGCAGGGGGGGTACAAAGGCAgggggtactaacccatagccgggtggtgg
tgtctatttttgcatttcaaaaaagttagtacccggtactactttAGGGG
TGGGGGTGTGTATTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNACCCTGCCTCTGTACCCCCCCTGGTACA
AGACCAGATTTtgccttttattttttttgcaaatactCGAATGATTTTTT
TGCGCACATGCCTAGATGCCTCAAAATAGAGTCATATGGGTTCTATAAGA
GAGTTGGACACCATTTAGGTAGAGTTAGGGAGATCTTCCCGACAAATTAT
AAGAGTAGCACATTTTATGCCCACGATTCGGAAAATTATTTAGTAGAGAT
ATATCTagtttttagtttattttttttagtttgagaAAACTATGTTAGAT
CGTCTGTAAAACTTATTTATTTCAGCTCATTTCAAACTCAGACGGAGCAA
ACGTCTTAACGTTAACGAATATGCTTATTGCAAAAATGGCGTCGCGACTA
TGAGCTCTGTTATGACGCAATGTTATGGTAAATCCAGTGATCATTATGAA
ATGAAGTGTAAAGTCAACCCATCCAAAACCTGTATTTATAAGGTTAATTG
TTCATTGACGAATCAAGGTTGGAATTGCCCTGGCGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043290-exon-sc0004098-1491911889:1..41 | TCONS_00043290-exon-sc0004098-1491911889:1..41 | Clytia hemisphaerica | exon |
| TCONS_00043290-exon-sc0004098-1510915933:1..41 | TCONS_00043290-exon-sc0004098-1510915933:1..41 | Clytia hemisphaerica | exon |
| TCONS_00043290-exon-sc0004098-1575043694:1..41 | TCONS_00043290-exon-sc0004098-1575043694:1..41 | Clytia hemisphaerica | exon |
| TCONS_00043290-exon-sc0004098-1491911889:270..450 | TCONS_00043290-exon-sc0004098-1491911889:270..450 | Clytia hemisphaerica | exon |
| TCONS_00043290-exon-sc0004098-1510915933:270..450 | TCONS_00043290-exon-sc0004098-1510915933:270..450 | Clytia hemisphaerica | exon |
| TCONS_00043290-exon-sc0004098-1575043694:270..450 | TCONS_00043290-exon-sc0004098-1575043694:270..450 | Clytia hemisphaerica | exon |
| TCONS_00043290-exon-sc0004098-1491911889:1176..1387 | TCONS_00043290-exon-sc0004098-1491911889:1176..1387 | Clytia hemisphaerica | exon |
| TCONS_00043290-exon-sc0004098-1510915933:1176..1387 | TCONS_00043290-exon-sc0004098-1510915933:1176..1387 | Clytia hemisphaerica | exon |
| TCONS_00043290-exon-sc0004098-1575043694:1176..1387 | TCONS_00043290-exon-sc0004098-1575043694:1176..1387 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004098 | supercontig | sc0004098:1..1387 + |
Blast
The following BLAST results are available for this feature:
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