TCONS_00043237 (transcript) - C. hemisphaerica

Overview
NameTCONS_00043237
Unique NameTCONS_00043237
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length153

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00043237 ID=TCONS_00043237|Name=TCONS_00043237|organism=Clytia hemisphaerica|type=transcript|length=153bp
ACCAGGTACAGGAACAACAGGTTTGACAGCTctaaataatttcttttgta
ctGCATTAGATTCGTGACTGGTTGAGGATGATCCTGTAGATGACACATCT
GTAATAATGATCATCTCTGCTTTGCCGTCAAAAATTAAGGTGTTGAGAAT
GGT
Run BLAST on NCBI

transcript from alignment at sc0004048:6925..7129-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00043237 ID=TCONS_00043237|Name=TCONS_00043237|organism=Clytia hemisphaerica|type=transcript|length=205bp|location=Sequence derived from alignment at sc0004048:6925..7129- (Clytia hemisphaerica)
ACCAGGTACAGGAACAACAGGTTTGACAGCTCTAAATAATTTCTTTTGTA
CTGCATNGTACAGGAACAACAGGTTTGACAGCTCTAAATAATTTCTTTTG
TACTGCATTAGATTCGTGACTGGTTGAGGATGATCCTGTAGATGACACAT
CTGTAATAATGATCATCTCTGCTTTGCCGTCAAAAATTAAGGTGTTGAGA
ATGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026950XLOC_026950Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00043237-exon-sc0004048-1575043694:7110..7129TCONS_00043237-exon-sc0004048-1575043694:7110..7129Clytia hemisphaericaexon
TCONS_00043237-exon-sc0004048-1575043694:6925..7057TCONS_00043237-exon-sc0004048-1575043694:6925..7057Clytia hemisphaericaexon
TCONS_00043237-exon-sc0004048-1510915933:7110..7129TCONS_00043237-exon-sc0004048-1510915933:7110..7129Clytia hemisphaericaexon
TCONS_00043237-exon-sc0004048-1510915933:6925..7057TCONS_00043237-exon-sc0004048-1510915933:6925..7057Clytia hemisphaericaexon
TCONS_00043237-exon-sc0004048-1491911889:7110..7129TCONS_00043237-exon-sc0004048-1491911889:7110..7129Clytia hemisphaericaexon
TCONS_00043237-exon-sc0004048-1491911889:6925..7057TCONS_00043237-exon-sc0004048-1491911889:6925..7057Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004048supercontigsc0004048:6925..7129 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00043237 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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