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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043212 ID=TCONS_00043212|Name=TCONS_00043212|organism=Clytia hemisphaerica|type=transcript|length=1038bp
CCATTTCACACATTCAGAttgcttgattttattaatGTAACATTAGAATA
ATTATCTTTGCCTTACATGCTGAGAACAAAACTAATGATGACTTTATGGA
TGTTTTAATTACTCTTTGTTATGTTTTTGGAATTTTGCACGAGTTCGAAC
TCTAGTAATTGCATTTACTCagttatttcttcatttttgtcatttttcgt
CATTAAGTACAtatgtatatttttttcattgtaaaaGCTAGATATAATAA
TTAGATCATAAAACATTCGGGATTCACAAAATCCCAAATTAGGCTATAGG
AGAGATACAGAAATGAATCTTTCCGAATCGGCTGTCTAATTAGTGAATCC
ATGTTATTTTGCATCGTTATTTTCAATATCCCAATCTATGGTAACCACAT
AACTTAACCTTGTGAAATGGAATTTAACAAGCttatttttgaaacttgtg
AGTACAATTTTTACATTGCAAAGACTAAATTCACAAATTTGTCatagcaa
agaataaaacaTACCCAGGATTTGAGTAATCCCAAATCAGACCAAAGAAA
ATGTCTTTGGGGTCGGAAATTGACTTTTCCAAACTTGGTATCAGAATAGT
TAGTTCCTCTGCTATTTTACATTGTGATTGTCAATATCCCAAGTTATGAC
GTATACAATTAACAAACTTGTGAAATGGGTTTTTACAACCTATTTTTCTT
AAGTTTgtgaaaataaatctttttaactAAAAAATACCCAGGATTTGAGA
AATCCCAAATCAGACTAAAGAAAATGTCTTTGGGGTCGGAAATTGATATT
CCCAAACTTGGTATCAGAACAGTTAGTTCCTATGCTATTTTACCTTGTGA
TTGTCAATATCCCAAGTTATGACGTATACAATTAACAAACTTGTGAAATG
GAACTTTACAacctatctttttaaaaattgtaaaaattaattCTATCAtt
gtgaaaatcaaattcacgatgaccttgtgaaaagaaaacttcaatgTGAA
ATAAGAAAACCCAATGTTCACAATATCCCAAACTTTAT Run BLAST on NCBI transcript from alignment at sc0004016:7478..8515 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043212 ID=TCONS_00043212|Name=TCONS_00043212|organism=Clytia hemisphaerica|type=transcript|length=1038bp|location=Sequence derived from alignment at sc0004016:7478..8515 (Clytia hemisphaerica)
ATAAAGTTTGGGATATTGTGAACATTGGGTTTTCTTATTTCAcattgaag
ttttcttttcacaaggtcatcgtgaatttgattttcacaaTGATAGaatt
aatttttacaatttttaaaaagataggtTGTAAAGTTCCATTTCACAAGT
TTGTTAATTGTATACGTCATAACTTGGGATATTGACAATCACAAGGTAAA
ATAGCATAGGAACTAACTGTTCTGATACCAAGTTTGGGAATATCAATTTC
CGACCCCAAAGACATTTTCTTTAGTCTGATTTGGGATTTCTCAAATCCTG
GGTATTTTTTagttaaaaagatttattttcacAAACTTAAGAAAAATAGG
TTGTAAAAACCCATTTCACAAGTTTGTTAATTGTATACGTCATAACTTGG
GATATTGACAATCACAATGTAAAATAGCAGAGGAACTAACTATTCTGATA
CCAAGTTTGGAAAAGTCAATTTCCGACCCCAAAGACATTTTCTTTGGTCT
GATTTGGGATTACTCAAATCCTGGGTAtgttttattctttgctatGACAA
ATTTGTGAATTTAGTCTTTGCAATGTAAAAATTGTACTcacaagtttcaa
aaataaGCTTGTTAAATTCCATTTCACAAGGTTAAGTTATGTGGTTACCA
TAGATTGGGATATTGAAAATAACGATGCAAAATAACATGGATTCACTAAT
TAGACAGCCGATTCGGAAAGATTCATTTCTGTATCTCTCCTATAGCCTAA
TTTGGGATTTTGTGAATCCCGAATGTTTTATGATCTAATTATTATATCTA
GCttttacaatgaaaaaaatatacataTGTACTTAATGacgaaaaatgac
aaaaatgaagaaataactGAGTAAATGCAATTACTAGAGTTCGAACTCGT
GCAAAATTCCAAAAACATAACAAAGAGTAATTAAAACATCCATAAAGTCA
TCATTAGTTTTGTTCTCAGCATGTAAGGCAAAGATAATTATTCTAATGTT
ACattaataaaatcaagcaaTCTGAATGTGTGAAATGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043212-exon-sc0004016-1491911889:7478..8515 | TCONS_00043212-exon-sc0004016-1491911889:7478..8515 | Clytia hemisphaerica | exon |
| TCONS_00043212-exon-sc0004016-1510915933:7478..8515 | TCONS_00043212-exon-sc0004016-1510915933:7478..8515 | Clytia hemisphaerica | exon |
| TCONS_00043212-exon-sc0004016-1575043694:7478..8515 | TCONS_00043212-exon-sc0004016-1575043694:7478..8515 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004016 | supercontig | sc0004016:7478..8515 . |
Blast
The following BLAST results are available for this feature:
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