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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043202 ID=TCONS_00043202|Name=TCONS_00043202|organism=Clytia hemisphaerica|type=transcript|length=708bp
ggttttcattattttataatttccaTTTTAAGGGGGTGGTCATGAGTTTT
NCCTGTGGAtggttttcattattttataatttccattttaagggggtggt
catgagtttttagttaaaattggttacaattttacaattgggcctacgaa
tgatttaaaaacactgaagttgagcccagtgcggttagcacgttcgacag
ttgtTACAGATGCACCGCTTTGGAATTTTCCATATTTGGAAAGATTAAAT
GATGTAATCATAGCGCAATGCTGAGTCTTCCAAATCTTCAGGCtacaatt
tccaaaaaaatggGGATCGTATGTTGAATATGGTATGATCGATTGTGGGA
TAATCTAAACAACATAACCAAAAAGATGGCGATTATTGTATTAAAATTAG
ATGGTGGATTATGTTCATTTTGACAACTGGTATAACCGTTTCGTTTTGGA
CATTGTTGTATGTATTATACATTGTTGAGAAGTACCTGATTCATTTTTGG
TTGGTACAtcatttttaattatttgttgGTTACATTGAACTTTTTCTACC
ATACCAGGGATCTGCATGCGATCCCTCATTGGACCCTTTTAAAAGGTCTT
ACTGGAtagtattttgtacattttgtactataggggtgggtgggtattta
aaattgaaatttgctacaaagtactgatacatgccgctgttttgtacatg
gaccccNN Run BLAST on NCBI transcript from alignment at sc0004011:7216..8298- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043202 ID=TCONS_00043202|Name=TCONS_00043202|organism=Clytia hemisphaerica|type=transcript|length=1083bp|location=Sequence derived from alignment at sc0004011:7216..8298- (Clytia hemisphaerica)
GGTTTTCATTATTTTATAATTTCCATTTTAAGGGGGTGGTCATGAGTTTT
NCCTGTGGATGGTTTTCATTATTTTATAATTTCCATTTTAAGGGGGTGGT
CATGAGTTTTTAGTTAAAATTGGTTACAATTTTACAATTGGGCCTACGAA
TGATTTAAAAACACTGAAGTTGAGCCCAGTGCGGTTAGCACGTTCGACAG
TTGTTACAGATGCACCGCTTTGGAATTTTCCATATTTGGAAAGATTAAAT
GATGTAATCATAGCGCAATGCTGAGTCTTCCAAATCTTCAGGCTACAATT
TCCAAAAAAATGGGTAAATTTAAATTTTTGTTCACTACAGTTAAATTTCG
CTCAGTCATCAGTTCTGTTTTCATTAATTGATTTGAATTATTGCCAGCTG
TTGATTACAAATTCCAAATCAATTAATGAATGAGTGCCAGCCAATTTTTG
CTTTTATCTGGTCTTTAAAATACATCACACTTCAGTCATCCAGACCAAAT
TATAGAAAGGCAGGCCAGCGCCCGCCCTTTTTTGACAGTTACCTTGAAAT
ATTACCATTTCTGTCAATAAAGTTTTGGTCTCCTCCCTTGGCCTAGAAAA
TGATTCTCCCTTATCTTCCTGGGGATTCCACATAATTGTATTTGGAAACA
ACCCACAATTGAAAAGATATTTTCAAATTCTTTTTCAGGGATCGTATGTT
GAATATGGTATGATCGATTGTGGGATAATCTAAACAACATAACCAAAAAG
ATGGCGATTATTGTATTAAAATTAGATGGTGGATTATGTTCATTTTGACA
ACTGGTATAACCGTTTCGTTTTGGACATTGTTGTATGTATTATACATTGT
TGAGAAGTACCTGATTCATTTTTGGTTGGTACATCATTTTTAATTATTTG
TTGGTTACATTGAACTTTTTCTACCATACCAGGGATCTGCATGCGATCCC
TCATTGGACCCTTTTAAAAGGTCTTACTGGATAGTATTTTGTACATTTTG
TACTATAGGGGTGGGTGGGTATTTAAAATTGAAATTTGCTACAAAGTACT
GATACATGCCGCTGTTTTGTACATGGACCCCNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043202-exon-sc0004011-1575043694:7986..8298 | TCONS_00043202-exon-sc0004011-1575043694:7986..8298 | Clytia hemisphaerica | exon |
| TCONS_00043202-exon-sc0004011-1575043694:7216..7610 | TCONS_00043202-exon-sc0004011-1575043694:7216..7610 | Clytia hemisphaerica | exon |
| TCONS_00043202-exon-sc0004011-1510915933:7986..8298 | TCONS_00043202-exon-sc0004011-1510915933:7986..8298 | Clytia hemisphaerica | exon |
| TCONS_00043202-exon-sc0004011-1510915933:7216..7610 | TCONS_00043202-exon-sc0004011-1510915933:7216..7610 | Clytia hemisphaerica | exon |
| TCONS_00043202-exon-sc0004011-1491911889:7986..8298 | TCONS_00043202-exon-sc0004011-1491911889:7986..8298 | Clytia hemisphaerica | exon |
| TCONS_00043202-exon-sc0004011-1491911889:7216..7610 | TCONS_00043202-exon-sc0004011-1491911889:7216..7610 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004011 | supercontig | sc0004011:7216..8298 - |
Blast
The following BLAST results are available for this feature:
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