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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043170 ID=TCONS_00043170|Name=TCONS_00043170|organism=Clytia hemisphaerica|type=transcript|length=277bp
aagtggcTTTTGGCGATAAGACTGAATTTGTGGTTGAATACAACGATTTT
GATATCCAGTCCGATCACGATACCGgTAATTGGTATGCAAACTTGCAAGA
AACAGAAAAGACAACTAACTGCCGTTATGACCTCCCGAAAAACATTGAAA
ACCGACCATCTGTGTATGCTATTGATGACGGTAAACTATGGCTTTTGTCA
GAAACACCAAATCTGAATTTCCCTTGGATGGATGCTCATCTCAAAGAATA
GTTTCCCATGTTGTATCTAAATGTACA Run BLAST on NCBI transcript from alignment at sc0003972:6694..8378- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043170 ID=TCONS_00043170|Name=TCONS_00043170|organism=Clytia hemisphaerica|type=transcript|length=1685bp|location=Sequence derived from alignment at sc0003972:6694..8378- (Clytia hemisphaerica)
AAGTGGCTTTTGGCGATAAGACTGAATTTGTGGTTGAATACAACGATTTT
GATATCCAGTCCGATCACGATACCGGTGAGAAATCAAGTTCAATCATAGG
GGCGTGAAATGAAACTTTTTTAGAAAAAAAAGCACGAAAAACCAAGGGTT
TCCCCTTAAAATAAATATAATTAAAAAAAGAAAAAAAAAGAATTAATTCA
CGAATTTCAAGGAACAAAATAAACTAGAGCTTAGCTTAATTTCAACTTTA
ACTTAACTTACTTGTTTTGCTTGTTGTTATTTATTAGCAATCAAAACCTT
TCGTAATGTTACAAATATTATCAGAAACATTTAAAAAAAGATACATTTTT
TGATTGACGTCATTAGGCTTTGGCTCTAATCGGTTTTCCCACGACTCCTC
TAATTTTCCTCATAGGCGAGACAAATTTAAATTTTTGTTCTACGGGAAGA
CTTTCAGAAAAAATATGGGTCGGTTGGTCGGTCGGTCGGTCGGTAAAATA
AAAGAAAAATTCTCCGAAAACCGACCCTTTGAGAGACAGATTTTTGCTGA
AAAAGTGACCCTTAGAAAGACTTTTTTGAAAGATTTTCTTCGATTTTGGA
AAAAGTGGTACCTACCCTTATAGAGATCTTTTTACAATTTGTTAATCCTC
CGGGTTTGCAATTTCAATATCATTACTTGTCGAATTTGGCAAAAACTGGG
TCGGTCGAACAATAAATTAATTTGGTCTCGCCTAATAGAAATAACATTGA
TTCTCATGTAAAATTTAACAAAAAAACCGAGCTTTGACAGCACTTTCTTA
TCGCAAAATGGTTACGTTTTTGCACCTTCAATTTCAACAGATTTGAATAT
TTCGGTAAAACCATTTCAAAAGTAAAAAACAACAATTTGCAAAAGGTAAA
AAAAAAGAAGGTGAAATTAATCAATAACTGGTTTACGTTTATCGTCAATT
TGAAAAATACCTCACTGTGCCCTTGACTATTTCTCTTTCTGTCTTTTTTT
TCTCTTCTAATTAGTTAAAATCGAACGGTCGTTACAATTATTTTTGGGGT
TTTTGGAGGTACAATTTCGGACCCCTCCCCCCCCCGTTTATTAGATGTTG
AGATGTTTTATTCAGATCCCCTCCCTACTACATATTCGGGACCTTAGAGA
TTTAGTAAAATTTCTTCATTACATTACTGAGATTTCGACGGACGTAAACA
AAAATCTCACTGGATAGCGTTTTATGGTGTCTACTGCAAAAATTTGTTCC
CGAAAAGTAATTTTCACTAAAATTTTTCATAAAGCCCCAGGAATATGAAA
GAACTTCGGCAAAAAGTGGGTGTCAGCCGCAAAAATTAGTTCCGCAAAAT
GCGCCAATTAGTACCCTCGCACTGCGAAAATAAGTTCCCGGTAAAATCAG
CAATCAAACAGCACCAGTTAATGTCGGAGATGTTAATTGTTTAATAGAGC
ACATTTATTGATTTTTGTTTTCAATTTTTATAGGTAATTGGTATGCAAAC
TTGCAAGAAACAGAAAAGACAACTAACTGCCGTTATGACCTCCCGAAAAA
CATTGAAAACCGACCATCTGTGTATGCTATTGATGACGGTAAACTATGGC
TTTTGTCAGAAACACCAAATCTGAATTTCCCTTGGATGGATGCTCATCTC
AAAGAATAGTTTCCCATGTTGTATCTAAATGTACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043170-exon-sc0003972-1575043694:8304..8378 | TCONS_00043170-exon-sc0003972-1575043694:8304..8378 | Clytia hemisphaerica | exon |
| TCONS_00043170-exon-sc0003972-1575043694:6694..6895 | TCONS_00043170-exon-sc0003972-1575043694:6694..6895 | Clytia hemisphaerica | exon |
| TCONS_00043170-exon-sc0003972-1510915933:8304..8378 | TCONS_00043170-exon-sc0003972-1510915933:8304..8378 | Clytia hemisphaerica | exon |
| TCONS_00043170-exon-sc0003972-1510915933:6694..6895 | TCONS_00043170-exon-sc0003972-1510915933:6694..6895 | Clytia hemisphaerica | exon |
| TCONS_00043170-exon-sc0003972-1491911889:8304..8378 | TCONS_00043170-exon-sc0003972-1491911889:8304..8378 | Clytia hemisphaerica | exon |
| TCONS_00043170-exon-sc0003972-1491911889:6694..6895 | TCONS_00043170-exon-sc0003972-1491911889:6694..6895 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003972 | supercontig | sc0003972:6694..8378 - |
Blast
The following BLAST results are available for this feature:
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