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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043143 ID=TCONS_00043143|Name=TCONS_00043143|organism=Clytia hemisphaerica|type=transcript|length=930bp
GCTACAAAGAGTTATTTGAAGCGGCATAAATTAACAGTTCATGACGGGAT
AAAGGCTTTTGAGTGTcaggaatgtggtaaatcttttggaCATAAATCGA
ACTTAAGTAAGCATCAAAGAACTGTTCATCTAGATTAAAAGACATTTAAA
TGTCAATAATCTACATTAAATCTCTTGTTACAAAGAGAAATTTAGAGAGT
CATCAATATTAACAGTTCATGGTAAAACTTTTCAGTGTCAAAACTATGGA
AatacttttgctgaaaaaggtTCGTTATGGAAACATAAAGAAAAGCACGT
GATAAAATCTAACCTTTTCAATGTCATGGATGTGGTCAGTCTTTTGTATT
TAGGTTTTTTTACAGGCGCGTCAAAAGGATGTTCAcaagaaaatgaaagt
ttttacGTGTGAAAAGTGTTGCAAATCTTTTGCAgggaaaactaatttga
agacgCACTAAACAACAGCCGGCAAGgcgataagaacatttttggatCTT
AAAAACGAAAATCTCATTGAATCTCAATGCCATTGACAAAGAGCTACCTA
TGCTGCCTTCAACAGTGCTTTCTCCTTGCAAGCTGGAACAGATGATTATG
CGCTgcaaatatttctcaaaatcatTCAAATTTGTGATAAATTACCAAGT
TAACAAAGCTATATTTTCTCTTAAATTGTGCTTTTTTGGTCAACTTTTCT
AAATCATAGGTGTATTTTAATTACGAAGACAGTCATAGTTATGTCAACAA
TATTATAAGCAAATTACAATTTTTGCTCTGAAATACTTGTAACATCTGAG
GTTAAAAGTTTTTGGATCGaaaagtttttcagaattttatatTGTTAAAT
ACCGTAAATCCTAAAATAAGTGCTCTgacgcttatttaatttttcaggct
ctaagggggggggggcgcttTTCAATCGGG Run BLAST on NCBI transcript from alignment at sc0003954:4058..4987 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043143 ID=TCONS_00043143|Name=TCONS_00043143|organism=Clytia hemisphaerica|type=transcript|length=930bp|location=Sequence derived from alignment at sc0003954:4058..4987 (Clytia hemisphaerica)
CCCGATTGAAaagcgcccccccccccttagagcctgaaaaattaaataag
cgtcAGAGCACTTATTTTAGGATTTACGGTATTTAACAatataaaattct
gaaaaacttttCGATCCAAAAACTTTTAACCTCAGATGTTACAAGTATTT
CAGAGCAAAAATTGTAATTTGCTTATAATATTGTTGACATAACTATGACT
GTCTTCGTAATTAAAATACACCTATGATTTAGAAAAGTTGACCAAAAAAG
CACAATTTAAGAGAAAATATAGCTTTGTTAACTTGGTAATTTATCACAAA
TTTGAatgattttgagaaatatttgcAGCGCATAATCATCTGTTCCAGCT
TGCAAGGAGAAAGCACTGTTGAAGGCAGCATAGGTAGCTCTTTGTCAATG
GCATTGAGATTCAATGAGATTTTCGTTTTTAAGatccaaaaatgttctta
tcgcCTTGCCGGCTGTTGTTTAGTGcgtcttcaaattagttttcccTGCA
AAAGATTTGCAACACTTTTCACACgtaaaaactttcattttcttgTGAAC
ATCCTTTTGACGCGCCTGTAAAAAAACCTAAATACAAAAGACTGACCACA
TCCATGACATTGAAAAGGTTAGATTTTATCACGTGCTTTTCTTTATGTTT
CCATAACGAacctttttcagcaaaagtatTTCCATAGTTTTGACACTGAA
AAGTTTTACCATGAACTGTTAATATTGATGACTCTCTAAATTTCTCTTTG
TAACAAGAGATTTAATGTAGATTATTGACATTTAAATGTCTTTTAATCTA
GATGAACAGTTCTTTGATGCTTACTTAAGTTCGATTTATGtccaaaagat
ttaccacattcctgACACTCAAAAGCCTTTATCCCGTCATGAACTGTTAA
TTTATGCCGCTTCAAATAACTCTTTGTAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043143-exon-sc0003954-1491911889:4058..4987 | TCONS_00043143-exon-sc0003954-1491911889:4058..4987 | Clytia hemisphaerica | exon |
| TCONS_00043143-exon-sc0003954-1510915933:4058..4987 | TCONS_00043143-exon-sc0003954-1510915933:4058..4987 | Clytia hemisphaerica | exon |
| TCONS_00043143-exon-sc0003954-1575043694:4058..4987 | TCONS_00043143-exon-sc0003954-1575043694:4058..4987 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003954 | supercontig | sc0003954:4058..4987 . |
Blast
The following BLAST results are available for this feature:
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