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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043139 ID=TCONS_00043139|Name=TCONS_00043139|organism=Clytia hemisphaerica|type=transcript|length=1477bp
ttacaaatatttttatataataatattctaacaccatcgaagaattctcc
ctccaaatttcaggtctctagctacactagaaaaagagatgtgcaaaatt
aaagaagcatgactgggaattttttttttcttttttgacacattttttcg
aattcttccaagctattttcctaaccttttttttgacatttttagtcaaa
tttttgacactaaaatttgaaaaatcttctggagttgctaatcATGCAAT
CCTGGAATCCAACAGCGAATGTAAAAAGgaggtaaaattttttttatttt
ttcaattcaaagtgaaacactttttctcaaaaatttagagtcggtcggag
gacacgaaccaaactaTCAATTACCTGATCAACAAcgtttcgcgcgaaag
tggatacCAGCCTTAACAACGTGATCAACACATAACCTAACTAACCAGCA
AGACTTCTGATTTTTGGCTTATTGAAACaggttaaattttgttttcccTA
CAGAACTTTTCCTTAGAGGCAATtgagcaagaacaatagaaataatCTTT
ATTTGGCTATTTAGAAAAATGCAAATTAGAAACTTGCTTAAATTCACGAT
AGATTCTTTTccccaaaacgaaacttttctaattttgtaaatctttcttc
cacttccccatacgtaaaatatagagtacaTTTGTTTTCCCCCAAAACTT
GCAAGCGAAAAATGTTAAGACGCATGTTGTCCTCGCGGATTTTCCtagcg
taatttatttgtgaGATGTcataataattctctttttggaTTACTGGCGG
CATTAATTTCAAGCGCTTActattatttttgaattttttgtttttaatgc
ctattttaaagaaaaatttgttgTTGCGTTCTCCCAAACAACTGTTGTTG
AAataggaaaaagaaaatagtTAAGTCTAGTCTAGCCTAACTGTCAGCTG
TCAGGGGGCATTAATTAAAAGAATATGAGAGCTTATttatatcaaaaaca
aaacacactGTTTCTCCCAAGCTGTAAAACCTTTTGGGATATTGCATTTA
TCCAAAAAGGAAAGTGGATTTAAAATTTCAGCGAAAGATTAGCACTGTAA
TCTGCTTAATGACTTTTTCTAAAAGGGCTAATTTTACCAGGAGAAATGTG
AGGATTTAGTTTCCAAAGTTGAGCTATCTGAGTAAACGCGAGAATTTGGA
ATTTCAAAcatatttgcaaaaaaaatgccaaaccaagtttaatagacctt
ttgcatCGTTTAGCACTAGATGCGTATACCATTTCATTTCCAGTTATAGT
TAGCAGCATTACGTAATTACTATTAAAAACATTATGTAATGTCTCCTCAC
AGTAACTTGATAGTAGTAGATCAATGTTTTAGCCCTTAATTTTTATCTAT
TGATTTTGCTATACTATGTCTGCACATCAGGCTAAAAAGTACATTCACAA
TCCCTAAATTTGGATAAAGGaaacaca Run BLAST on NCBI transcript from alignment at sc0003952:5618..7094+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043139 ID=TCONS_00043139|Name=TCONS_00043139|organism=Clytia hemisphaerica|type=transcript|length=1477bp|location=Sequence derived from alignment at sc0003952:5618..7094+ (Clytia hemisphaerica)
ttacaaatatttttatataataatattctaacaccatcgaagaattctcc
ctccaaatttcaggtctctagctacactagaaaaagagatgtgcaaaatt
aaagaagcatgactgggaattttttttttcttttttgacacattttttcg
aattcttccaagctattttcctaaccttttttttgacatttttagtcaaa
tttttgacactaaaatttgaaaaatcttctggagttgctaatcATGCAAT
CCTGGAATCCAACAGCGAATGTAAAAAGgaggtaaaattttttttatttt
ttcaattcaaagtgaaacactttttctcaaaaatttagagtcggtcggag
gacacgaaccaaactaTCAATTACCTGATCAACAAcgtttcgcgcgaaag
tggatacCAGCCTTAACAACGTGATCAACACATAACCTAACTAACCAGCA
AGACTTCTGATTTTTGGCTTATTGAAACaggttaaattttgttttcccTA
CAGAACTTTTCCTTAGAGGCAATtgagcaagaacaatagaaataatCTTT
ATTTGGCTATTTAGAAAAATGCAAATTAGAAACTTGCTTAAATTCACGAT
AGATTCTTTTccccaaaacgaaacttttctaattttgtaaatctttcttc
cacttccccatacgtaaaatatagagtacaTTTGTTTTCCCCCAAAACTT
GCAAGCGAAAAATGTTAAGACGCATGTTGTCCTCGCGGATTTTCCtagcg
taatttatttgtgaGATGTcataataattctctttttggaTTACTGGCGG
CATTAATTTCAAGCGCTTActattatttttgaattttttgtttttaatgc
ctattttaaagaaaaatttgttgTTGCGTTCTCCCAAACAACTGTTGTTG
AAataggaaaaagaaaatagtTAAGTCTAGTCTAGCCTAACTGTCAGCTG
TCAGGGGGCATTAATTAAAAGAATATGAGAGCTTATttatatcaaaaaca
aaacacactGTTTCTCCCAAGCTGTAAAACCTTTTGGGATATTGCATTTA
TCCAAAAAGGAAAGTGGATTTAAAATTTCAGCGAAAGATTAGCACTGTAA
TCTGCTTAATGACTTTTTCTAAAAGGGCTAATTTTACCAGGAGAAATGTG
AGGATTTAGTTTCCAAAGTTGAGCTATCTGAGTAAACGCGAGAATTTGGA
ATTTCAAAcatatttgcaaaaaaaatgccaaaccaagtttaatagacctt
ttgcatCGTTTAGCACTAGATGCGTATACCATTTCATTTCCAGTTATAGT
TAGCAGCATTACGTAATTACTATTAAAAACATTATGTAATGTCTCCTCAC
AGTAACTTGATAGTAGTAGATCAATGTTTTAGCCCTTAATTTTTATCTAT
TGATTTTGCTATACTATGTCTGCACATCAGGCTAAAAAGTACATTCACAA
TCCCTAAATTTGGATAAAGGaaacaca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043139-exon-sc0003952-1491911889:5618..7094 | TCONS_00043139-exon-sc0003952-1491911889:5618..7094 | Clytia hemisphaerica | exon |
| TCONS_00043139-exon-sc0003952-1510915933:5618..7094 | TCONS_00043139-exon-sc0003952-1510915933:5618..7094 | Clytia hemisphaerica | exon |
| TCONS_00043139-exon-sc0003952-1575043694:5618..7094 | TCONS_00043139-exon-sc0003952-1575043694:5618..7094 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003952 | supercontig | sc0003952:5618..7094 + |
Blast
The following BLAST results are available for this feature:
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