TCONS_00043132 (transcript) - C. hemisphaerica

Overview
NameTCONS_00043132
Unique NameTCONS_00043132
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length99

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00043132 ID=TCONS_00043132|Name=TCONS_00043132|organism=Clytia hemisphaerica|type=transcript|length=99bp
ATTATGAGAAAATGGGCATTGGATGCTACATATATTTCGGCATAAAGGAA
AAAGATCATTATTTCTGTATCGATGCAACCCATTCAAAGCAAGCTGCAA
Run BLAST on NCBI

transcript from alignment at sc0003944:3986..4605+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00043132 ID=TCONS_00043132|Name=TCONS_00043132|organism=Clytia hemisphaerica|type=transcript|length=620bp|location=Sequence derived from alignment at sc0003944:3986..4605+ (Clytia hemisphaerica)
ATTATGAGAAAATGGGCATTGGATGCTACATATATTTCGGCATAAAGGAA
AAAGATCATTATTTCTGGTATGaacctttttaaactttatttcCAACTTG
AAACACGTTTCCCTTTTTATTTGCTGATGATATGGATGCCTGTCCATGAA
ATTTTCGTTGTTCTCATGATTTTCATCGACTAGATAGAATGAATGAATTT
TTCAATGTCTTATtctgaaatgttttcaaaaagggGTTTCAGAGGTGCAG
TGCTCTTTATTATAGGACAGTACTTATTAGCCGGTGGAAAAGGAAATACA
TAAGGTTAACATTAATATCAGCGTCATTAAGAGGTAAAAGTTTATTGGTA
TCAGAGTAATTTTCAGAGCGCTATTCAGTAATTCATAATGATTTGAATGT
TTCTATTCACCCTCGAATTTGCGTCAATGGGAAAAAGGGGGATATCATGT
GATTTTTGTTCATTTCGTTCACATTCTAAAAGATNTTTGCGTCAATGGGA
AATAGGGGGATATCATGTGATTTTTGTTCATTTCGTTCACATTCTAAAAG
ATTTCACAATCACAAAAAATGCTCTTTATTTCGTTTAGTATCGATGCAAC
CCATTCAAAGCAAGCTGCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026861XLOC_026861Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00043132-exon-sc0003944-1491911889:3986..4052TCONS_00043132-exon-sc0003944-1491911889:3986..4052Clytia hemisphaericaexon
TCONS_00043132-exon-sc0003944-1510915933:3986..4052TCONS_00043132-exon-sc0003944-1510915933:3986..4052Clytia hemisphaericaexon
TCONS_00043132-exon-sc0003944-1575043694:3986..4052TCONS_00043132-exon-sc0003944-1575043694:3986..4052Clytia hemisphaericaexon
TCONS_00043132-exon-sc0003944-1491911889:4574..4605TCONS_00043132-exon-sc0003944-1491911889:4574..4605Clytia hemisphaericaexon
TCONS_00043132-exon-sc0003944-1510915933:4574..4605TCONS_00043132-exon-sc0003944-1510915933:4574..4605Clytia hemisphaericaexon
TCONS_00043132-exon-sc0003944-1575043694:4574..4605TCONS_00043132-exon-sc0003944-1575043694:4574..4605Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003944supercontigsc0003944:3986..4605 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00043132 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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