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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043086 ID=TCONS_00043086|Name=TCONS_00043086|organism=Clytia hemisphaerica|type=transcript|length=735bp
CTTATCTCCTGTTTTTTAGAGAGCGACGAATTTAGGTGTGAATCGAATCC
GTTTGAAGTTGAAAGGCATGGGACCAGGTCGACAGGATGCAGTCAAAGGC
CTGATAGCGTCTGGTATGGACATCGTTTCGATCACTGACGTTACACCGAC
CCCTCATAACGGCCCTAAACCTAAGAAACAAAGACGACTGTGATGCCGAC
AGACCATACCGAAGAGAAAAGTTCTACAATGGAGACTATTCGATGGATTA
AGTTGCTACTATTGTAAACAATAATCGAGAGCATTTTGACCTGATCCTAT
TGACTTAATATGCTTGATATGTGACTTTTTAAACATAAGACATATGGGCt
gtttgagaaaaatattccatttaatcgtTAGCAGTTGACAGAACATAATG
ATGTACGCTTTGACGATGCTTGTAAAATCTAGATTTATGGTCGGTTtaac
ataatatcaaaacaatagaaatttcattttagttttCAGATGTTGAAAAA
ACTCTAAGGATACTTTTCCACTTCATTCAGTATATCAATATTTTCGTTTG
GTGTTAAAGGACATTTTCTTTGAGCGGCCCAACCAAATTATAGATCGAAA
GCTTGATGTTTGCCCATTCTAACGATCACTAAATGGAAAGAAAAAGAACT
TTCTTATCAGTTGTCATATTTTTATATAGATATTATATATTGTGTACATA
TTATTACCCTAGGAATtacaaaattcattttttac Run BLAST on NCBI transcript from alignment at sc0003907:3607..5148- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043086 ID=TCONS_00043086|Name=TCONS_00043086|organism=Clytia hemisphaerica|type=transcript|length=1542bp|location=Sequence derived from alignment at sc0003907:3607..5148- (Clytia hemisphaerica)
CTTATCTCCTGTTTTTTAGAGAGCGACGAATTTAGGTGTGAATCGAATCC
GTTTGAAGTTGAAAGGCATGGGACCAGGTCGACAGGTAAGAGACAATTTT
AAGCTTTTTACTGTGTGTGTGTCCGGTCGAGTGGAACAAAATCTGAAATG
GGAATTCTTTGCTCACTCAATAAATCTAGCAAGCACTAGTTGACCCCTTG
GACCACCAAAACAGCAAAATTACCCCCCCCAAATAGAGCAGGGTTACCCC
CGGATAAGGCAAATTTTGTCGATTTTTCACTACACCCCTGACACTATAGC
CTCCAAACCCCCCCCCATGTACGAACATTTCCTGGAAGAGCCCCAAGAGA
CAATTCAACAGGTGTTTAAAAACATCAAGCAATTGCTCATAGAGTTGCAA
GCCTTTTTCTTTCTGTAAATTCTGCTCCGCTACTTCACAGACGCACGCTT
TTTCTATATTCAGTTTCACTACAGACCTTTTTTATAAGAACCAGTAAATT
ATTTCTGGGGCTCAACTGGCCTTTTCTTTTGAGTTTCTTGAACCTCGTAT
TTTCTTATTCTGTTCTTATTTTTAAGTTCAAAATAGCGGTTTTCAGGCTT
TTCATTTTCAAAATTGTTGTTATTTTTTATAAGCACAACTTATTTTTTAT
AAGCACAACTTATTTTTAGCCTCGTTATTTATATGAAATTGTTCTTGTAA
AAAAAAAGAGTGCATATACTTTAGATCATCGTTTTTATCATCCTATGTCT
AAAACAGAAATCTGAACTCTTGACCTTTATCCTCTTTACATGCCACAAGC
AAGCATTTTTAACGATTAAAGTAAATCATAAATCAAGTCAAAAATTCTCA
TGAACACATCTTTTATTGTGCTTTATTATCCTTCCCCAATAGGATGCAGT
CAAAGGCCTGATAGCGTCTGGTATGGACATCGTTTCGATCACTGACGTTA
CACCGACCCCTCATAACGGCCCTAAACCTAAGAAACAAAGACGACTGTGA
TGCCGACAGACCATACCGAAGAGAAAAGTTCTACAATGGAGACTATTCGA
TGGATTAAGTTGCTACTATTGTAAACAATAATCGAGAGCATTTTGACCTG
ATCCTATTGACTTAATATGCTTGATATGTGACTTTTTAAACATAAGACAT
ATGGGCTGTTTGAGAAAAATATTCCATTTAATCGTTAGCAGTTGACAGAA
CATAATGATGTACGCTTTGACGATGCTTGTAAAATCTAGATTTATGGTCG
GTTTAACATAATATCAAAACAATAGAAATTTCATTTTAGTTTTCAGATGT
TGAAAAAACTCTAAGGATACTTTTCCACTTCATTCAGTATATCAATATTT
TCGTTTGGTGTTAAAGGACATTTTCTTTGAGCGGCCCAACCAAATTATAG
ATCGAAAGCTTGATGTTTGCCCATTCTAACGATCACTAAATGGAAAGAAA
AAGAACTTTCTTATCAGTTGTCATATTTTTATATAGATATTATATATTGT
GTACATATTATTACCCTAGGAATTACAAAATTCATTTTTTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043086-exon-sc0003907-1575043694:5064..5148 | TCONS_00043086-exon-sc0003907-1575043694:5064..5148 | Clytia hemisphaerica | exon |
| TCONS_00043086-exon-sc0003907-1575043694:3607..4256 | TCONS_00043086-exon-sc0003907-1575043694:3607..4256 | Clytia hemisphaerica | exon |
| TCONS_00043086-exon-sc0003907-1510915933:5064..5148 | TCONS_00043086-exon-sc0003907-1510915933:5064..5148 | Clytia hemisphaerica | exon |
| TCONS_00043086-exon-sc0003907-1510915933:3607..4256 | TCONS_00043086-exon-sc0003907-1510915933:3607..4256 | Clytia hemisphaerica | exon |
| TCONS_00043086-exon-sc0003907-1491911889:5064..5148 | TCONS_00043086-exon-sc0003907-1491911889:5064..5148 | Clytia hemisphaerica | exon |
| TCONS_00043086-exon-sc0003907-1491911889:3607..4256 | TCONS_00043086-exon-sc0003907-1491911889:3607..4256 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003907 | supercontig | sc0003907:3607..5148 - |
Blast
The following BLAST results are available for this feature:
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