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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043015 ID=TCONS_00043015|Name=TCONS_00043015|organism=Clytia hemisphaerica|type=transcript|length=1218bp
GGGCCACTTTTGGTTGGTTTTTGTTggatttgagccaaaaaatcgataaa
aacggGGTGGAAAGCATCGTTATGGTCATAActcaatcttccaagaaatg
gacttaaagcttttttattttgatgcgacgatatATGGCTTACAgttaag
tgaaaatttgaatCACTACCACATGAGATTAATTTATTTCTATACATaag
aattttgttgttttttgtatcaatatttttaaagaggtccgcaaaaaaat
tataaggaaaaagtaaaagattaattttaattaatttttggttaaattat
tttttgcaatTATATCTTattggattttatttttttgggtaattattttc
tctctttttttattattcttaGATTTTTTCTATTCGTTCACGTGACTTTT
TTGCCTTTATTGTCCATTGCTTTCTTACAGGGAGCTTAAAAACAATAAGT
TACCCGcttgttttttcataagaaccagtaaattttgccTGAGCCTGAGG
TTGTTCctaaatttctattgttccaaacaatAGAGCTTTTCTGAGGGTCT
AACTCTGAGGgaggtgttcttataaaattgctcTTATgaataaaaagcgt
gtaacNGAGGGTCTAACTCTGAGGgaggtgttcttataaaattgctcTTA
TgaataaaaagcgtgtaaataaattactaaatttttgaCATTCAACATAG
CGTAACAAACCCCAGATGCAGCTGCAGAAAAGCGAGAATTTAATACCCTT
TTTCGTCATTGCAACATATCGTTCAAttctttttatgagaacaacCATGC
GATAAAACTTAGCAAACTTATCCGAAAATACTGTTGCAAATTGGAAGTAT
TTATCGACTTAACTACAAAACATTGTTGAGGTGGCAGAGAAACTTCCATA
ATGGTTCTCCCAGTGTCTgctatataatttttaaaacttagAAGTGCAAC
CAAGACTAAGTATTTAAAACAAGCTCCttttatattcttataaaaaaaag
atcgTGCAGTGCTTCTCTATCTACTTGATTGTCTATCCACCTCCTCATAA
CTCAAAAAAGGGGGTCGATAACTTTGTATGTGTAAATGCAACGTAATGTA
TTGTGTGCTGTTTAAAGATACGACTTGCAtgttagactagtaaactagtc
ggttattacttataaccttataataaaactgtcaatcaaataatgtaaac
actaattaaatattcagc Run BLAST on NCBI transcript from alignment at sc0003858:6337..7554 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043015 ID=TCONS_00043015|Name=TCONS_00043015|organism=Clytia hemisphaerica|type=transcript|length=1218bp|location=Sequence derived from alignment at sc0003858:6337..7554 (Clytia hemisphaerica)
gctgaatatttaattagtgtttacattatttgattgacagttttattata
aggttataagtaataaccgactagtttactagtctaacaTGCAAGTCGTA
TCTTTAAACAGCACACAATACATTACGTTGCATTTACACATACAAAGTTA
TCGACCCCCTTTTTTGAGTTATGAGGAGGTGGATAGACAATCAAGTAGAT
AGAGAAGCACTGCAcgatcttttttttataagaatataaaaGGAGCTTGT
TTTAAATACTTAGTCTTGGTTGCACTTctaagttttaaaaattatatagc
AGACACTGGGAGAACCATTATGGAAGTTTCTCTGCCACCTCAACAATGTT
TTGTAGTTAAGTCGATAAATACTTCCAATTTGCAACAGTATTTTCGGATA
AGTTTGCTAAGTTTTATCGCATGgttgttctcataaaaagaaTTGAACGA
TATGTTGCAATGACGAAAAAGGGTATTAAATTCTCGCTTTTCTGCAGCTG
CATCTGGGGTTTGTTACGCTATGTTGAATGtcaaaaatttagtaatttat
ttacacgctttttattcATAAgagcaattttataagaacacctcCCTCAG
AGTTAGACCCTCNgttacacgctttttattcATAAgagcaattttataag
aacacctcCCTCAGAGTTAGACCCTCAGAAAAGCTCTattgtttggaaca
atagaaatttagGAACAACCTCAGGCTCAggcaaaatttactggttctta
tgaaaaaacaagCGGGTAACTTATTGTTTTTAAGCTCCCTGTAAGAAAGC
AATGGACAATAAAGGCAAAAAAGTCACGTGAACGAATAGAAAAAATCtaa
gaataataaaaaaagagagaaaataattacccaaaaaaataaaatccaat
AAGATATAattgcaaaaaataatttaaccaaaaattaattaaaattaatc
ttttactttttccttataatttttttgcggacctctttaaaaatattgat
acaaaaaacaacaaaattcttATGTATAGAAATAAATTAATCTCATGTGG
TAGTGattcaaattttcacttaacTGTAAGCCATatatcgtcgcatcaaa
ataaaaaagctttaagtccatttcttggaagattgagTTATGACCATAAC
GATGCTTTCCACCccgtttttatcgattttttggctcaaatccAACAAAA
ACCAACCAAAAGTGGCCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043015-exon-sc0003858-1491911889:6337..7554 | TCONS_00043015-exon-sc0003858-1491911889:6337..7554 | Clytia hemisphaerica | exon |
| TCONS_00043015-exon-sc0003858-1510915933:6337..7554 | TCONS_00043015-exon-sc0003858-1510915933:6337..7554 | Clytia hemisphaerica | exon |
| TCONS_00043015-exon-sc0003858-1575043694:6337..7554 | TCONS_00043015-exon-sc0003858-1575043694:6337..7554 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003858 | supercontig | sc0003858:6337..7554 . |
Blast
The following BLAST results are available for this feature:
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