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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042995 ID=TCONS_00042995|Name=TCONS_00042995|organism=Clytia hemisphaerica|type=transcript|length=674bp
GGagtgcgcagagtcatttacagatttttcttgtaacaatgagaagacaa
tggatctctcttgggagcaacgagagaagttaatccacctattctaatcc
gttgataTGACTTATTTTAACTGCTTCTGCTTACTAGTTTGTTGTTTAAT
TTGATTGTCTGGCCTACTTTTAATTGTGATTTGTTACATTCTATTAAATT
TGTGTTCCTTTGAATAAACTACTATAGCATTTTTATCTACGTTTTGTTGa
tacaatattttcaaattgaagaaaaagtttgaatCAAATATTTGTAATct
gattaattaattttttcactctaGTGATCAAGTGATTTATTTTGATGGAT
AATCAGCATTCAAAAGatgttcaacttggagaaatGCTGTTAACTGGATG
CTGGACATATGCTGCCATACGTTGAAGTTCTTGAacgaaatttgaaatga
taacaaCGTGATAATACTTTGAAAAGACTGCCATCGGAGAAAGAGTAGCG
TGCTATTCCGATTGATTGACGGAGAACAAATTATGGTAAACGATCGAAAG
AGACAATCCAACTTGTAATGGTTATAgattacatgatttttttagaagca
tacaaaaatccgaaaacaggctcagagatgcttaggtagAAAGCttgata
aggctgaaaaatgcttgagggggt Run BLAST on NCBI transcript from alignment at sc0003840:2761..4077- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042995 ID=TCONS_00042995|Name=TCONS_00042995|organism=Clytia hemisphaerica|type=transcript|length=1317bp|location=Sequence derived from alignment at sc0003840:2761..4077- (Clytia hemisphaerica)
GGAGTGCGCAGAGTCATTTACAGATTTTTCTTGTAACAATGAGAAGACAA
TGGATCTCTCTTGGGAGCAACGAGAGAAGTTAATCCACCTATTCTAATCC
GTTGATATGACTTATTTTAACTGCTTCTGCTTACTAGTTTGTTGTTTAAT
TTGATTGTCTGGCCTACTTTTAATTGTGATTTGTTACATTCTATTAAATT
TGTGTTCCTTTGAATAAACTACTATAGCATTTTTATCTACGTTTTGTTGA
TACAATATTTTCAAATTGAAGAAAAAGTTTGAATCAAATATTTGTAATCT
GATTAATTAATTTTTTCACTCTAGTGATCAAGTGATTTATTTTGATGGAT
AATCAGCATTCAAAAGATGTTCAACTTGGAGAAATGGTAAAATTATAGTT
TCTTGGGTTTTAATGGAATATTACATTCTGCTGGGGGTCTCAAAAGGGGG
GTGGCAAATGTTTCATTTCAGGGAGATTCTGAAAAGGAGAAAGAAGGAGA
GAATGGGAAAAAAGTTCTGACAAAGCTCATACCATTTGCAGCAAATTTAT
TACTTAGCAGTTGAAAAATCGTGCATTATTGGCTGAATCACTTTCTAAAA
AGTATGCATATTTTTGGCAAAATTTAAGAATAATGGGCTAAACGTCTCAG
AGGGAGGGGCAAAATATGTTTCCATTTTCTGGTTTGGAAGGTAATTTTTT
GGTTTACAGACATTGGAAAGGAACCTTTAGACCGGATTCAAACTTGAATT
AATGGTTGAGAAAATAAAAGAAATGTGTTTTTAGATACCAGAAAACAACG
AAAGTTTTGCAGTGGTTAACTTGTGTTAAGGGTGCCATTAAGGAAAGCAG
TATTGGAGAGCATTTGTTATTTCCTTTATATCGCATCATACCATAACATC
CGATACGATCAGTTCCATTGATATCCTGTGTGGCCTTCTTGGTAGAAAAT
TAAAACCATTCATCATGACGCCTGCTTTTAACCATGCAGATCATGGCTTA
TGATTGAAGCAATTCCCTTTCCATTTTAGCTGTTAACTGGATGCTGGACA
TATGCTGCCATACGTTGAAGTTCTTGAACGAAATTTGAAATGATAACAAC
GTGATAATACTTTGAAAAGACTGCCATCGGAGAAAGAGTAGCGTGCTATT
CCGATTGATTGACGGAGAACAAATTATGGTAAACGATCGAAAGAGACAAT
CCAACTTGTAATGGTTATAGATTACATGATTTTTTTAGAAGCATACAAAA
ATCCGAAAACAGGCTCAGAGATGCTTAGGTAGAAAGCTTGATAAGGCTGA
AAAATGCTTGAGGGGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042995-exon-sc0003840-1575043694:3692..4077 | TCONS_00042995-exon-sc0003840-1575043694:3692..4077 | Clytia hemisphaerica | exon |
| TCONS_00042995-exon-sc0003840-1575043694:2761..3048 | TCONS_00042995-exon-sc0003840-1575043694:2761..3048 | Clytia hemisphaerica | exon |
| TCONS_00042995-exon-sc0003840-1510915933:3692..4077 | TCONS_00042995-exon-sc0003840-1510915933:3692..4077 | Clytia hemisphaerica | exon |
| TCONS_00042995-exon-sc0003840-1510915933:2761..3048 | TCONS_00042995-exon-sc0003840-1510915933:2761..3048 | Clytia hemisphaerica | exon |
| TCONS_00042995-exon-sc0003840-1491911889:3692..4077 | TCONS_00042995-exon-sc0003840-1491911889:3692..4077 | Clytia hemisphaerica | exon |
| TCONS_00042995-exon-sc0003840-1491911889:2761..3048 | TCONS_00042995-exon-sc0003840-1491911889:2761..3048 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003840 | supercontig | sc0003840:2761..4077 - |
Blast
The following BLAST results are available for this feature:
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