TCONS_00042991 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042991
Unique NameTCONS_00042991
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length111

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042991 ID=TCONS_00042991|Name=TCONS_00042991|organism=Clytia hemisphaerica|type=transcript|length=111bp
AGCAATTTTCATGAAACTTGATCTCTAAGGAAGACGTTAACGAATTGGAT
CGGACAGATTGCTCATCATCTTGTGACTTTTCGACGTcttgtactctcgg
gtacctaatag
Run BLAST on NCBI

transcript from alignment at sc0003834:6564..7266+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042991 ID=TCONS_00042991|Name=TCONS_00042991|organism=Clytia hemisphaerica|type=transcript|length=703bp|location=Sequence derived from alignment at sc0003834:6564..7266+ (Clytia hemisphaerica)
AGCAATTTTCATGAAACTTGATCTCTAAGGAAGGTAAggatatttgaatt
tgaaataattctagGTTACTTTTAGACTGAGGTAATTATTGCCAATTATT
TCAGGGTACATGATCTGTAACATGGAATTGTACATATTATATAGTTATAC
AGAGTTCTATCaccttttttaaggggggggggggtcaaaccATGTGAAAA
TGTTTCAAAGGAAGGGAGATCCCATTTGAAAGGAATTGACATAAATTCTA
ATTTTTCTGGTCAGGAATGGAGATTTTAATCGGTATTTTTAAACTATCTA
ATAGGAAATTTGCCCAATNGGGTCGAACCATGTGAAAATGTTTCAAAGGA
AAGGAGATCCCATTTGAAAGGAATTGACATAAATTCTAATTTTTCTGGTC
AGGAATGGAGATTTTAATCGGTATTTTTAAACTATCTAATAGGAAATTTG
CCCAATTTATGACCCAGTCCCCATTTTTAGGCAATATCAGTGCGGTATAT
GAGTGGTAAGCAGTCAGATTGGGAATCGGAATTTTGCCAAGATGAGAAGA
TCAGACCCATCCACACTATACCACTTTCCACACTATGAAATTATGTTaat
tttatttctctttttcatTCTATAGACGTTAACGAATTGGATCGGACAGA
TTGCTCATCATCTTGTGACTTTTCGACGTcttgtactctcgggtacctaa
tag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026742XLOC_026742Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042991-exon-sc0003834-1491911889:6564..6596TCONS_00042991-exon-sc0003834-1491911889:6564..6596Clytia hemisphaericaexon
TCONS_00042991-exon-sc0003834-1510915933:6564..6596TCONS_00042991-exon-sc0003834-1510915933:6564..6596Clytia hemisphaericaexon
TCONS_00042991-exon-sc0003834-1575043694:6564..6596TCONS_00042991-exon-sc0003834-1575043694:6564..6596Clytia hemisphaericaexon
TCONS_00042991-exon-sc0003834-1491911889:7189..7266TCONS_00042991-exon-sc0003834-1491911889:7189..7266Clytia hemisphaericaexon
TCONS_00042991-exon-sc0003834-1510915933:7189..7266TCONS_00042991-exon-sc0003834-1510915933:7189..7266Clytia hemisphaericaexon
TCONS_00042991-exon-sc0003834-1575043694:7189..7266TCONS_00042991-exon-sc0003834-1575043694:7189..7266Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003834supercontigsc0003834:6564..7266 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042991 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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