TCONS_00042955 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042955
Unique NameTCONS_00042955
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length156

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042955 ID=TCONS_00042955|Name=TCONS_00042955|organism=Clytia hemisphaerica|type=transcript|length=156bp
CAAACGAGAGAAATCGAGCAATGCCGCAGAGCGATTACAAATGGAGAGTG
CGAGGAAGTCCTCAAGGaggattatatttaaaaaagatattttgtaaaac
aagaTCGGTTTAGTAAcctttgtaataaaccaaaccaatgtatgagcgat
ttatag
Run BLAST on NCBI

transcript from alignment at sc0003805:1331..1486

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042955 ID=TCONS_00042955|Name=TCONS_00042955|organism=Clytia hemisphaerica|type=transcript|length=156bp|location=Sequence derived from alignment at sc0003805:1331..1486 (Clytia hemisphaerica)
ctataaatcgctcatacattggtttggtttattacaaaggTTACTAAACC
GAtcttgttttacaaaatatcttttttaaatataatcctCCTTGAGGACT
TCCTCGCACTCTCCATTTGTAATCGCTCTGCGGCATTGCTCGATTTCTCT
CGTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026717XLOC_026717Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042955-exon-sc0003805-1491911889:1331..1486TCONS_00042955-exon-sc0003805-1491911889:1331..1486Clytia hemisphaericaexon
TCONS_00042955-exon-sc0003805-1510915933:1331..1486TCONS_00042955-exon-sc0003805-1510915933:1331..1486Clytia hemisphaericaexon
TCONS_00042955-exon-sc0003805-1575043694:1331..1486TCONS_00042955-exon-sc0003805-1575043694:1331..1486Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003805supercontigsc0003805:1331..1486 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042955 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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