TCONS_00042946 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042946
Unique NameTCONS_00042946
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length167

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042946 ID=TCONS_00042946|Name=TCONS_00042946|organism=Clytia hemisphaerica|type=transcript|length=167bp
caATGTAAATCAACGTAAATAAATCCCTTGGTTTGGTTTGGTGTGGTTTG
TATTCGTTGTTGAAAATCATTGCTTGGATGTACTTGTACGattaaaaaga
ctttaatttgtTACCAGCTGAATGATTAAACGAACCCTTTTTATATAGAC
AAAATAATTGAACTGTA
Run BLAST on NCBI

transcript from alignment at sc0003802:836..1002

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042946 ID=TCONS_00042946|Name=TCONS_00042946|organism=Clytia hemisphaerica|type=transcript|length=167bp|location=Sequence derived from alignment at sc0003802:836..1002 (Clytia hemisphaerica)
TACAGTTCAATTATTTTGTCTATATAAAAAGGGTTCGTTTAATCATTCAG
CTGGTAacaaattaaagtctttttaatCGTACAAGTACATCCAAGCAATG
ATTTTCAACAACGAATACAAACCACACCAAACCAAACCAAGGGATTTATT
TACGTTGATTTACATtg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026711XLOC_026711Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042946-exon-sc0003802-1491911889:836..1002TCONS_00042946-exon-sc0003802-1491911889:836..1002Clytia hemisphaericaexon
TCONS_00042946-exon-sc0003802-1510915933:836..1002TCONS_00042946-exon-sc0003802-1510915933:836..1002Clytia hemisphaericaexon
TCONS_00042946-exon-sc0003802-1575043694:836..1002TCONS_00042946-exon-sc0003802-1575043694:836..1002Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003802supercontigsc0003802:836..1002 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042946 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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