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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042939 ID=TCONS_00042939|Name=TCONS_00042939|organism=Clytia hemisphaerica|type=transcript|length=1140bp
TTTGTGAATGCTCAAATGTAGAAATAACTCGTCGGTTTTACACAACTTTT
CTTTGACATCAAATTCCATTTATTGTTCATAAAGATTCATGTTCTGTAAA
AGGTCTTACAATGCTCAGCAAAACAAATCAGCATACATTTCGATGAAGAG
ATTTTCACTGTAAAGGTCGGCCACTGCCCAAAAGACCTTTGTCAAAGTGA
TGAAACACAAAACAGGGTGAAACGTAGAAATCGACTCCATTAGAGAATAT
ATCTTCTGTATTTTCCAATAGGTGAAAATCTGTGATTTCACCCACGTATG
CTCTCTGAGCATTTCTCACACAATTCTACTAACAAATATCTGCTTTTTAT
ACATATCTAGCAGATTCTACAATAATTACAAAACACATTAAAATCCTCAA
AGGAATAGAATAACAAAACAAAAATTAGTTACAGAACATTGAAGCGATAA
AAGACAATTAACTATGTACAATAAATGAATTAATTAGATAAAAGTATTCT
CTTGATATTTACAAATAAACTGACGCACAGCGGCAGTAACACTCCCGACC
GTCAAGAACCAAAGCTCTTGACAAAAAAAAATATATTACAACATTTGACC
AGCAAATAAAGTTCAACAATCTTTTTGAAATCGTCTAATCATAACCAGAG
ACAAATTAAGTGCATCTGTGTTCAGCGAACAACACTCTAGTTCCTGCAAC
ATCATGCAACAACATTAATTTAGCGCAACCCCAAAGCAACACACAGCTTT
TCCCAAAAGTTGCGAAGACCCAACTCGAGCCTTCTCTGGTACTGAAACAG
TTTGATTTATTTGACGAGCACACAAGCAATCCAAATGATTCAACAACCAA
TGATACGTCGCCAAACAATAAGGCTGTCCAACTTCCTTTGTGAATGCTCA
AATGTAGAAATAACTCGTCGTTTTACACAATTTTTATTTGACATCATTCC
ATTTATTGTTCATAAAGATTCATGTTCTGTAAAAGGTCTTACAATGCTCA
GCGAAACAAATCAGCATACATTTCGATGAATAGATTTTCACTGTAAAGGT
CGGCCACTGCCCAAAAGACCTTTGTCAAAGTGATGAAACACAAAACAGGG
TGAAACGTAGAAATCGACTCCATTAGAGAATATATCTTCT Run BLAST on NCBI transcript from alignment at sc0003796:203..1342 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042939 ID=TCONS_00042939|Name=TCONS_00042939|organism=Clytia hemisphaerica|type=transcript|length=1140bp|location=Sequence derived from alignment at sc0003796:203..1342 (Clytia hemisphaerica)
AGAAGATATATTCTCTAATGGAGTCGATTTCTACGTTTCACCCTGTTTTG
TGTTTCATCACTTTGACAAAGGTCTTTTGGGCAGTGGCCGACCTTTACAG
TGAAAATCTATTCATCGAAATGTATGCTGATTTGTTTCGCTGAGCATTGT
AAGACCTTTTACAGAACATGAATCTTTATGAACAATAAATGGAATGATGT
CAAATAAAAATTGTGTAAAACGACGAGTTATTTCTACATTTGAGCATTCA
CAAAGGAAGTTGGACAGCCTTATTGTTTGGCGACGTATCATTGGTTGTTG
AATCATTTGGATTGCTTGTGTGCTCGTCAAATAAATCAAACTGTTTCAGT
ACCAGAGAAGGCTCGAGTTGGGTCTTCGCAACTTTTGGGAAAAGCTGTGT
GTTGCTTTGGGGTTGCGCTAAATTAATGTTGTTGCATGATGTTGCAGGAA
CTAGAGTGTTGTTCGCTGAACACAGATGCACTTAATTTGTCTCTGGTTAT
GATTAGACGATTTCAAAAAGATTGTTGAACTTTATTTGCTGGTCAAATGT
TGTAATATATTTTTTTTTGTCAAGAGCTTTGGTTCTTGACGGTCGGGAGT
GTTACTGCCGCTGTGCGTCAGTTTATTTGTAAATATCAAGAGAATACTTT
TATCTAATTAATTCATTTATTGTACATAGTTAATTGTCTTTTATCGCTTC
AATGTTCTGTAACTAATTTTTGTTTTGTTATTCTATTCCTTTGAGGATTT
TAATGTGTTTTGTAATTATTGTAGAATCTGCTAGATATGTATAAAAAGCA
GATATTTGTTAGTAGAATTGTGTGAGAAATGCTCAGAGAGCATACGTGGG
TGAAATCACAGATTTTCACCTATTGGAAAATACAGAAGATATATTCTCTA
ATGGAGTCGATTTCTACGTTTCACCCTGTTTTGTGTTTCATCACTTTGAC
AAAGGTCTTTTGGGCAGTGGCCGACCTTTACAGTGAAAATCTCTTCATCG
AAATGTATGCTGATTTGTTTTGCTGAGCATTGTAAGACCTTTTACAGAAC
ATGAATCTTTATGAACAATAAATGGAATTTGATGTCAAAGAAAAGTTGTG
TAAAACCGACGAGTTATTTCTACATTTGAGCATTCACAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042939-exon-sc0003796-1491911889:203..1342 | TCONS_00042939-exon-sc0003796-1491911889:203..1342 | Clytia hemisphaerica | exon |
| TCONS_00042939-exon-sc0003796-1510915933:203..1342 | TCONS_00042939-exon-sc0003796-1510915933:203..1342 | Clytia hemisphaerica | exon |
| TCONS_00042939-exon-sc0003796-1575043694:203..1342 | TCONS_00042939-exon-sc0003796-1575043694:203..1342 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003796 | supercontig | sc0003796:203..1342 . |
Blast
The following BLAST results are available for this feature:
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